Os09g0250300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os09g0250300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 193.18 | 0.653 | 11.3 | -2.59 | 0.886 | 0.983 | 0.19 | -1.36 | -0.978 | 9.71 | 29.4 | 22 | -- | -- |
| 193.58 | 0.653 | 11.3 | -2.77 | 0.889 | 0.849 | 0.262 | -- | -0.998 | 9.63 | 29.4 | 21 | -- | -- |
| 193.02 | 0.652 | 11.3 | -2.66 | 0.898 | 0.909 | -- | -0.857 | -0.969 | 9.71 | 29.48 | 21 | -- | -- |
| 193.82 | 0.653 | 11.3 | -2.76 | 0.887 | 0.858 | -- | -- | -0.996 | 9.71 | 29.4 | 21 | -- | -- |
| 237.57 | 0.718 | 11.3 | -2.64 | -- | 0.872 | -- | -1.19 | -1.01 | -- | 29.4 | 44 | -- | -- |
| 223.62 | 0.701 | 11.3 | -2.94 | 0.875 | -- | 0.941 | -- | -1.07 | 7.77 | -- | -- | -- | -- |
| 225.97 | 0.704 | 11.3 | -2.91 | 0.872 | -- | -- | -- | -1.07 | 8.02 | -- | -- | -- | -- |
| 238.69 | 0.72 | 11.3 | -2.77 | -- | 0.787 | -- | -- | -1.03 | -- | 29.4 | 44 | -- | -- |
| 390.23 | 0.925 | 11.2 | -- | 0.945 | 1.15 | -- | -- | -0.671 | 10.4 | 29.4 | 21 | -- | -- |
| 267.58 | 0.764 | 11.3 | -2.9 | -- | -- | -- | -- | -1.06 | -- | -- | -- | -- | -- |
| 449.21 | 0.991 | 11.2 | -- | 0.856 | -- | -- | -- | -0.742 | 8.26 | -- | -- | -- | -- |
| 439.74 | 0.977 | 11.2 | -- | -- | 1 | -- | -- | -0.686 | -- | 29.4 | 22 | -- | -- |
| 489.72 | 1.03 | 11.3 | -- | -- | -- | -- | -- | -0.733 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 188.66 | wind | 1 | 43200 | < th | dose dependent | rect. | 13 | 13 |
| 6 | 190.71 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 8 | 190.78 | wind | 1 | 43200 | < th | dose independent | rect. | 16 | 10 |
| 10 | 190.81 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 13 | 191.28 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 16 | 191.56 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 18 | 191.60 | wind | 1 | 43200 | < th | dose independent | rect. | 14 | 12 |
| 19 | 191.62 | wind | 1 | 43200 | > th | dose independent | rect. | 16 | 10 |
| 20 | 191.67 | wind | 1 | 43200 | < th | dose dependent | sin | 17 | NA |
| 21 | 191.69 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 27 | 191.97 | temperature | 25 | 90 | > th | dose dependent | rect. | 9 | 9 |
| 33 | 192.36 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 38 | 192.74 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 40 | 192.83 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 42 | 192.88 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 44 | 192.89 | wind | 1 | 43200 | > th | dose independent | rect. | 14 | 12 |
| 45 | 192.98 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 48 | 193.09 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 54 | 193.29 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 60 | 193.43 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 62 | 193.53 | radiation | 20 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 80 | 194.06 | temperature | 25 | 90 | > th | dose dependent | rect. | 4 | 14 |
| 84 | 194.11 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 98 | 194.34 | humidity | 60 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 100 | 194.40 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 101 | 194.41 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 106 | 194.49 | humidity | 70 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 108 | 194.52 | temperature | 25 | 90 | > th | dose independent | rect. | 9 | 9 |
| 113 | 194.57 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 116 | 194.61 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 4 |
| 117 | 194.62 | radiation | 30 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 129 | 194.76 | humidity | 70 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 142 | 194.94 | humidity | 70 | 43200 | < th | dose independent | rect. | 13 | 7 |
| 166 | 195.09 | radiation | 20 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 179 | 195.20 | radiation | 20 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 206 | 195.48 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 207 | 195.49 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 214 | 195.51 | humidity | 70 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 220 | 195.55 | radiation | 10 | 43200 | > th | dose independent | sin | 10 | NA |
| 227 | 195.62 | humidity | 70 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 231 | 195.64 | radiation | 10 | 43200 | > th | dose independent | rect. | 16 | 19 |
| 241 | 195.69 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 23 |
| 246 | 195.71 | radiation | 10 | 43200 | > th | dose independent | rect. | 17 | 17 |
| 247 | 195.72 | humidity | 70 | 43200 | > th | dose independent | sin | 20 | NA |
| 251 | 195.72 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 253 | 195.72 | humidity | 70 | 43200 | < th | dose dependent | rect. | 10 | 20 |
| 260 | 195.73 | humidity | 70 | 43200 | < th | dose dependent | rect. | 23 | 19 |
| 278 | 195.75 | humidity | 70 | 43200 | < th | dose dependent | rect. | 17 | 23 |
| 279 | 195.75 | humidity | 70 | 43200 | < th | dose dependent | rect. | 19 | 23 |
| 281 | 195.76 | humidity | 70 | 43200 | < th | dose dependent | no | NA | NA |
| 291 | 195.77 | radiation | 1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 324 | 195.81 | radiation | 10 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 389 | 195.86 | humidity | 70 | 43200 | > th | dose independent | rect. | 5 | 15 |
| 409 | 195.88 | humidity | 70 | 43200 | < th | dose independent | sin | 20 | NA |
| 412 | 195.88 | humidity | 70 | 43200 | < th | dose dependent | sin | 18 | NA |
| 450 | 195.92 | humidity | 70 | 43200 | < th | dose dependent | rect. | 10 | 12 |
| 517 | 195.99 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 10 |
| 529 | 196.00 | humidity | 70 | 43200 | < th | dose dependent | rect. | 10 | 8 |
| 549 | 196.04 | humidity | 70 | 43200 | < th | dose dependent | rect. | 13 | 7 |
| 566 | 196.06 | radiation | 20 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 627 | 196.15 | humidity | 70 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 628 | 196.15 | humidity | 80 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 654 | 196.19 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 656 | 196.19 | humidity | 90 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 665 | 196.20 | humidity | 70 | 43200 | < th | dose independent | rect. | 3 | 17 |
| 751 | 196.28 | humidity | 70 | 43200 | < th | dose independent | rect. | 17 | 18 |
| 755 | 196.29 | temperature | 25 | 90 | > th | dose dependent | rect. | 20 | 22 |
| 764 | 196.32 | radiation | 20 | 43200 | > th | dose independent | sin | 22 | NA |
| 793 | 196.37 | radiation | 20 | 43200 | > th | dose independent | rect. | 16 | 22 |
| 870 | 196.44 | radiation | 20 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 885 | 196.46 | radiation | 20 | 43200 | < th | dose dependent | rect. | 10 | 5 |
| 947 | 196.57 | humidity | 60 | 90 | > th | dose independent | rect. | 15 | 21 |
| 990 | 196.61 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 20 |