Os09g0248300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Frigida-like family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0248300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Frigida-like family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.47 | 0.251 | 12.2 | 1.29 | 0.934 | 0.757 | 0.284 | -0.419 | 0.577 | 18.4 | 80 | 2860 | -- | -- |
| 28.45 | 0.248 | 12.2 | 1.24 | 0.942 | 0.689 | 0.286 | -- | 0.561 | 18.4 | 81.19 | 2803 | -- | -- |
| 28.66 | 0.249 | 12.2 | 1.28 | 0.935 | 0.759 | -- | -0.41 | 0.578 | 18.4 | 80.04 | 2863 | -- | -- |
| 28.63 | 0.249 | 12.2 | 1.24 | 0.94 | 0.703 | -- | -- | 0.58 | 18.4 | 81.39 | 2858 | -- | -- |
| 73.17 | 0.398 | 12.1 | 1.28 | -- | 0.877 | -- | -0.471 | 0.586 | -- | 81 | 2750 | -- | -- |
| 34.84 | 0.277 | 12.2 | 1.27 | 0.959 | -- | 0.312 | -- | 0.489 | 18.3 | -- | -- | -- | -- |
| 35.07 | 0.277 | 12.2 | 1.26 | 0.96 | -- | -- | -- | 0.49 | 18.3 | -- | -- | -- | -- |
| 73.34 | 0.399 | 12.2 | 1.22 | -- | 0.822 | -- | -- | 0.552 | -- | 81 | 2750 | -- | -- |
| 67.43 | 0.382 | 12.2 | -- | 1.03 | 0.831 | -- | -- | 0.569 | 18.4 | 82.63 | 3371 | -- | -- |
| 82.95 | 0.426 | 12.2 | 1.24 | -- | -- | -- | -- | 0.469 | -- | -- | -- | -- | -- |
| 77.13 | 0.411 | 12.2 | -- | 0.943 | -- | -- | -- | 0.349 | 18.4 | -- | -- | -- | -- |
| 104.06 | 0.475 | 12.2 | -- | -- | 1.12 | -- | -- | 0.425 | -- | 73 | 47487 | -- | -- |
| 123.36 | 0.518 | 12.2 | -- | -- | -- | -- | -- | 0.332 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.23 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 13 |
| 2 | 28.24 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 3 | 28.24 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 10 |
| 13 | 28.25 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 5 |
| 27 | 28.28 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 56 | 28.43 | humidity | 60.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 57 | 28.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 72 | 28.47 | humidity | 60.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 89 | 28.50 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 102 | 28.50 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 109 | 28.54 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 113 | 28.57 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 13 | NA |
| 132 | 28.66 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 135 | 28.67 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 17 |
| 140 | 28.69 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 170 | 28.71 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 172 | 28.71 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 187 | 28.74 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 219 | 28.77 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 15 | 4 |
| 222 | 28.78 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 223 | 28.78 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 252 | 28.78 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 253 | 28.78 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 278 | 28.80 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 14 |
| 280 | 28.80 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 283 | 28.80 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 310 | 28.83 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 368 | 28.87 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 375 | 28.88 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 15 |
| 433 | 28.92 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 450 | 28.92 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 17 | 21 |
| 473 | 28.94 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 511 | 28.96 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 570 | 28.97 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 6 | 17 |
| 575 | 28.98 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 10 |
| 577 | 28.98 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 14 | 19 |
| 609 | 29.00 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 671 | 29.02 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 723 | 29.04 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 763 | 29.05 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 840 | 29.07 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 877 | 29.08 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 903 | 29.09 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 931 | 29.10 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 941 | 29.10 | humidity | 60.0 | 1440 | > th | dose dependent | no | NA | NA |
| 969 | 29.11 | humidity | 70.0 | 1440 | > th | dose independent | sin | 17 | NA |