Os09g0244900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transport protein particle (TRAPP) component, Bet3 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0244900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Transport protein particle (TRAPP) component, Bet3 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.41 | 0.207 | 9.72 | 0.00465 | 0.389 | 0.539 | 0.119 | -0.997 | 0.19 | 17.2 | 19.98 | 814 | -- | -- |
| 20.07 | 0.209 | 9.7 | 0.223 | 0.466 | 0.499 | 0.0895 | -- | 0.257 | 17.4 | 17.36 | 1008 | -- | -- |
| 19.44 | 0.205 | 9.72 | 0.00981 | 0.399 | 0.536 | -- | -0.96 | 0.192 | 17.2 | 19.98 | 840 | -- | -- |
| 20.05 | 0.209 | 9.7 | 0.219 | 0.414 | 0.54 | -- | -- | 0.25 | 17.2 | 17.2 | 855 | -- | -- |
| 22.82 | 0.222 | 9.73 | -0.0968 | -- | 0.778 | -- | -1.66 | 0.147 | -- | 22.11 | 484 | -- | -- |
| 25.05 | 0.235 | 9.68 | 0.378 | 0.475 | -- | 0.0862 | -- | 0.346 | 18.2 | -- | -- | -- | -- |
| 25.07 | 0.234 | 9.68 | 0.377 | 0.476 | -- | -- | -- | 0.346 | 18.2 | -- | -- | -- | -- |
| 23.5 | 0.226 | 9.7 | 0.188 | -- | 0.756 | -- | -- | 0.213 | -- | 18.66 | 430 | -- | -- |
| 21.17 | 0.214 | 9.7 | -- | 0.435 | 0.624 | -- | -- | 0.211 | 17.1 | 16.86 | 933 | -- | -- |
| 36.8 | 0.283 | 9.67 | 0.364 | -- | -- | -- | -- | 0.336 | -- | -- | -- | -- | -- |
| 28.82 | 0.251 | 9.69 | -- | 0.47 | -- | -- | -- | 0.304 | 18.2 | -- | -- | -- | -- |
| 24.24 | 0.229 | 9.7 | -- | -- | 0.863 | -- | -- | 0.179 | -- | 17.4 | 434 | -- | -- |
| 40.29 | 0.296 | 9.68 | -- | -- | -- | -- | -- | 0.295 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.65 | temperature | 15 | 10 | > th | dose dependent | sin | 13 | NA |
| 6 | 17.76 | temperature | 30 | 90 | < th | dose dependent | sin | 14 | NA |
| 61 | 18.33 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 75 | 18.41 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 76 | 18.41 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 80 | 18.42 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 85 | 18.44 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 90 | 18.46 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 152 | 18.58 | temperature | 15 | 720 | > th | dose dependent | rect. | 13 | 13 |
| 158 | 18.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 171 | 18.63 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 11 |
| 184 | 18.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 15 |
| 199 | 18.68 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 13 |
| 256 | 18.76 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 379 | 18.89 | temperature | 15 | 720 | > th | dose dependent | rect. | 9 | 17 |
| 383 | 18.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 9 |
| 402 | 18.92 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 456 | 18.95 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 7 |
| 532 | 19.00 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 775 | 19.12 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 791 | 19.12 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 865 | 19.14 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 21 |
| 898 | 19.16 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |