Os09g0244600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0244600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.31 | 0.306 | 2.77 | -6.87e-05 | 0.0429 | 0.176 | 0.51 | 0.693 | -0.0433 | 4.6 | 1015 | 4496 | -- | -- |
| 43.47 | 0.307 | 2.76 | 0.109 | 0.0588 | 0.154 | 0.425 | -- | -0.0171 | 4.07 | 1014 | 4600 | -- | -- |
| 42.79 | 0.305 | 2.77 | -0.0023 | 0.0706 | 0.192 | -- | 0.671 | -0.0363 | 1.09 | 1015 | 4509 | -- | -- |
| 43.76 | 0.308 | 2.76 | 0.095 | 0.0765 | 0.162 | -- | -- | -0.0204 | 0.955 | 1014 | 4600 | -- | -- |
| 43.12 | 0.306 | 2.77 | 0.0079 | -- | 0.183 | -- | 0.644 | -0.0353 | -- | 1015 | 4519 | -- | -- |
| 44.28 | 0.312 | 2.77 | 0.0929 | 0.0508 | -- | 0.431 | -- | -0.0422 | 4.03 | -- | -- | -- | -- |
| 44.62 | 0.313 | 2.77 | 0.0872 | 0.0752 | -- | -- | -- | -0.0446 | 0.698 | -- | -- | -- | -- |
| 44.13 | 0.309 | 2.76 | 0.0967 | -- | 0.161 | -- | -- | -0.0204 | -- | 1014 | 4600 | -- | -- |
| 44 | 0.309 | 2.77 | -- | 0.0721 | 0.159 | -- | -- | -0.0289 | 1.04 | 1014 | 4600 | -- | -- |
| 44.97 | 0.313 | 2.77 | 0.0898 | -- | -- | -- | -- | -0.0432 | -- | -- | -- | -- | -- |
| 44.82 | 0.313 | 2.77 | -- | 0.0766 | -- | -- | -- | -0.0543 | 0.751 | -- | -- | -- | -- |
| 44.38 | 0.31 | 2.77 | -- | -- | 0.157 | -- | -- | -0.0316 | -- | 1014 | 4600 | -- | -- |
| 45.18 | 0.314 | 2.77 | -- | -- | -- | -- | -- | -0.0532 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.92 | temperature | 25.0 | 30 | > th | dose independent | rect. | 19 | 1 |
| 3 | 39.72 | wind | 1.0 | 270 | < th | dose dependent | rect. | 21 | 1 |
| 4 | 39.76 | wind | 3.0 | 90 | < th | dose dependent | rect. | 19 | 1 |
| 5 | 39.96 | wind | 5.0 | 1440 | < th | dose independent | rect. | 1 | 2 |
| 6 | 39.98 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 7 | 40.00 | wind | 5.0 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 10 | 40.05 | wind | 7.0 | 1440 | < th | dose independent | rect. | 24 | 5 |
| 49 | 40.14 | wind | 3.0 | 10 | < th | dose dependent | rect. | 19 | 1 |
| 84 | 40.26 | wind | 7.0 | 1440 | < th | dose independent | rect. | 24 | 8 |
| 114 | 40.41 | wind | 3.0 | 90 | < th | dose independent | rect. | 19 | 1 |
| 151 | 40.71 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 1 |
| 196 | 41.06 | wind | 1.0 | 270 | < th | dose dependent | rect. | 14 | 8 |
| 205 | 41.15 | wind | 1.0 | 270 | < th | dose independent | rect. | 21 | 1 |
| 215 | 41.22 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 219 | 41.22 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 286 | 41.51 | temperature | 25.0 | 30 | > th | dose independent | rect. | 19 | 4 |
| 322 | 41.61 | humidity | 50.0 | 720 | < th | dose dependent | rect. | 13 | 1 |
| 328 | 41.63 | humidity | 50.0 | 720 | < th | dose dependent | rect. | 15 | 1 |
| 351 | 41.73 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 374 | 41.82 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 24 | 3 |
| 383 | 41.85 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 451 | 41.99 | wind | 3.0 | 10 | < th | dose dependent | rect. | 14 | 7 |
| 484 | 42.08 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 486 | 42.08 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 507 | 42.12 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 515 | 42.12 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 24 | 6 |
| 519 | 42.13 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 525 | 42.14 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 529 | 42.14 | humidity | 50.0 | 720 | < th | dose independent | rect. | 13 | 3 |
| 537 | 42.14 | temperature | 25.0 | 30 | > th | dose independent | rect. | 19 | 9 |
| 548 | 42.16 | humidity | 50.0 | 720 | < th | dose independent | rect. | 13 | 1 |
| 555 | 42.17 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 24 | 6 |
| 556 | 42.17 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 24 | 6 |
| 574 | 42.18 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 577 | 42.19 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 579 | 42.19 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 640 | 42.22 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 677 | 42.24 | humidity | 50.0 | 720 | > th | dose independent | rect. | 24 | 17 |
| 767 | 42.29 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 769 | 42.29 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 19 | 4 |
| 905 | 42.35 | wind | 1.0 | 270 | < th | dose independent | rect. | 15 | 7 |
| 919 | 42.35 | wind | 1.0 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 935 | 42.36 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 3 | NA |
| 937 | 42.36 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 952 | 42.36 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 965 | 42.37 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 3 | NA |
| 984 | 42.37 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 3 | NA |