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Os09g0133200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Dehydrogenase/reductase SDR family member 4 (EC 1.1.1.184) (NADPH- dependent carbonyl reductase/NADP-retinol dehydrogenase) (CR) (PHCR) (Peroxisomal short-chain alcohol dehydrogenase) (NADPH-dependent retinol dehydrogenase/reductase) (NDRD) (SCAD-SRL) (humNRDR) (PSCD). Splice isoform 2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.011) R2 : 0.156
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.212 (0.0231) R2dN8 : 0.201 R2N8 : 0.156
σ : 0.207
deviance : 19.57
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
11.84 0.162 12.5 -0.37 0.268 0.181 -0.0857 -0.47 0.123 19.8 20.53 831 -- --
12.35 0.164 12.5 -0.292 0.28 0.232 -0.218 -- 0.126 19.8 21.4 1155 -- --
11.86 0.16 12.5 -0.372 0.268 0.176 -- -0.496 0.123 19.8 20.56 804 -- --
12.47 0.164 12.5 -0.283 0.28 0.225 -- -- 0.129 19.8 21.4 1142 -- --
15.31 0.182 12.5 -0.384 -- 0.247 -- -0.401 0.103 -- 21.4 721 -- --
13.9 0.175 12.5 -0.198 0.287 -- -0.215 -- 0.194 20.2 -- -- -- --
14.04 0.175 12.5 -0.191 0.287 -- -- -- 0.194 20.1 -- -- -- --
15.83 0.185 12.5 -0.288 -- 0.27 -- -- 0.116 -- 21.3 738 -- --
14.14 0.175 12.5 -- 0.267 0.132 -- -- 0.176 19.9 22.36 784 -- --
18.58 0.201 12.5 -0.194 -- -- -- -- 0.19 -- -- -- -- --
15.01 0.181 12.5 -- 0.289 -- -- -- 0.215 20.1 -- -- -- --
17.81 0.197 12.5 -- -- 0.187 -- -- 0.156 -- 22.22 701 -- --
19.57 0.207 12.5 -- -- -- -- -- 0.212 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.49 radiation 10 30 < th dose independent rect. 6 4
3 11.51 humidity 90 14400 > th dose independent rect. 22 9
4 11.53 humidity 90 14400 < th dose independent rect. 23 8
11 11.58 humidity 90 14400 < th dose independent rect. 22 5
15 11.58 radiation 40 43200 < th dose dependent rect. 22 7
16 11.59 humidity 90 14400 < th dose independent rect. 23 2
21 11.60 humidity 90 14400 > th dose independent rect. 22 6
38 11.61 humidity 90 14400 > th dose dependent rect. 5 1
40 11.62 humidity 90 14400 > th dose independent rect. 5 1
44 11.63 humidity 90 14400 > th dose independent rect. 23 1
53 11.63 humidity 90 14400 > th dose dependent rect. 4 3
68 11.65 wind 1 43200 < th dose independent rect. 2 1
80 11.65 humidity 80 14400 > th dose dependent rect. 24 1
82 11.66 humidity 90 14400 > th dose independent sin 9 NA
84 11.66 wind 1 43200 > th dose independent rect. 2 1
88 11.66 radiation 40 43200 < th dose dependent rect. 19 10
134 11.71 humidity 80 14400 > th dose dependent rect. 23 8
141 11.72 humidity 90 14400 > th dose dependent rect. 3 6
145 11.73 humidity 90 14400 < th dose independent sin 10 NA
155 11.73 humidity 80 14400 > th dose dependent rect. 23 4
176 11.75 radiation 30 30 < th dose dependent rect. 6 5
177 11.75 humidity 90 14400 > th dose dependent rect. 22 11
184 11.76 radiation 10 43200 < th dose dependent rect. 4 1
216 11.77 temperature 10 720 > th dose dependent rect. 19 12
231 11.78 temperature 20 720 < th dose independent rect. 22 20
232 11.78 humidity 90 14400 > th dose dependent sin 7 NA
251 11.78 temperature 10 10 > th dose dependent rect. 6 16
255 11.79 radiation 30 14400 > th dose independent rect. 7 1
276 11.79 wind 1 43200 < th dose dependent rect. 2 1
315 11.81 temperature 20 720 > th dose independent rect. 19 22
319 11.81 radiation 1 43200 > th dose dependent rect. 18 1
337 11.81 humidity 90 14400 > th dose dependent rect. 13 17
346 11.82 radiation 20 43200 < th dose independent rect. 22 8
347 11.82 radiation 40 14400 < th dose independent rect. 22 10
352 11.82 radiation 10 30 < th dose independent rect. 6 16
374 11.82 temperature 25 720 < th dose dependent rect. 16 18
380 11.83 radiation 40 14400 < th dose independent rect. 24 8
405 11.83 humidity 90 14400 > th dose dependent rect. 16 14
447 11.84 temperature 25 720 < th dose dependent rect. 22 21
451 11.85 humidity 90 14400 > th dose independent rect. 4 3
453 11.85 radiation 40 14400 < th dose independent rect. 4 4
522 11.86 temperature 25 720 < th dose dependent rect. 19 21
562 11.87 temperature 25 720 < th dose dependent rect. 17 21
577 11.88 radiation 1 14400 < th dose independent rect. 18 11
578 11.88 radiation 20 43200 < th dose independent rect. 19 11
620 11.89 humidity 80 10 > th dose independent rect. 6 4
637 11.89 temperature 20 720 > th dose independent rect. 10 22
640 11.89 temperature 25 720 < th dose dependent sin 10 NA
641 11.89 temperature 30 1440 < th dose dependent rect. 5 1
672 11.90 wind 9 43200 > th dose independent rect. 16 1
715 11.91 humidity 90 14400 < th dose independent rect. 5 1
716 11.91 temperature 20 1440 > th dose independent rect. 5 2
739 11.91 temperature 25 720 < th dose dependent no NA NA
740 11.91 temperature 15 1440 > th dose dependent rect. 5 1
741 11.91 temperature 20 1440 < th dose dependent rect. 2 3
755 11.92 wind 3 43200 > th dose independent rect. 13 1
756 11.92 wind 3 43200 < th dose independent rect. 13 1
757 11.92 temperature 20 1440 < th dose independent rect. 5 1
759 11.92 wind 9 43200 < th dose independent rect. 21 4
815 11.93 temperature 20 1440 > th dose independent sin 7 NA
817 11.93 temperature 20 1440 < th dose independent sin 7 NA
826 11.93 radiation 1 14400 > th dose independent rect. 18 11
827 11.93 temperature 20 1440 < th dose independent rect. 22 13
830 11.93 temperature 20 1440 > th dose independent rect. 21 14
850 11.93 radiation 10 270 < th dose independent rect. 13 19
854 11.93 temperature 20 720 < th dose independent rect. 12 22
860 11.93 radiation 30 14400 > th dose dependent rect. 7 1
877 11.93 temperature 25 1440 < th dose dependent rect. 21 9
903 11.93 temperature 15 720 > th dose dependent rect. 15 17
952 11.94 temperature 20 720 > th dose independent rect. 4 23
957 11.94 wind 1 43200 < th dose dependent rect. 11 1