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Os09g0126600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10 (0.0147) R2 : 0.7
β1 : 1.15 (0.0539) R2dD : 0.31 R2D : 0.212
β2 : 0.815 (0.0362) R2dC : 0.335 R2C : 0.295
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.44 (0.0314) R2dN8 : 0.173 R2N8 : 0.0519
σ : 0.277
deviance : 34.92
__
_____
C
peak time of C : 21.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.97 0.253 10.1 0.7 0.822 0.0136 -0.385 -2.86 0.372 21.5 29.8 1392 -- --
29.12 0.251 10 1.24 0.807 -0.317 -0.382 -- 0.417 21.5 28.89 5781 -- --
29.51 0.253 10.1 0.707 0.824 0.0158 -- -2.91 0.372 21.5 29.75 1362 -- --
28.88 0.25 9.96 1.29 0.824 -0.424 -- -- 0.616 21.5 30.97 12511 -- --
69.4 0.388 10.1 0.563 -- 0.075 -- -3.09 0.323 -- 27.92 2990 -- --
34.3 0.275 10 1.13 0.813 -- -0.415 -- 0.439 21.4 -- -- -- --
34.92 0.277 10 1.15 0.815 -- -- -- 0.44 21.3 -- -- -- --
67.43 0.382 9.96 1.26 -- -0.37 -- -- 0.601 -- 30.33 13101 -- --
68.19 0.385 10 -- 0.784 -0.196 -- -- 0.31 21.4 34.64 7311 -- --
73.72 0.401 9.98 1.15 -- -- -- -- 0.437 -- -- -- -- --
69.72 0.391 10 -- 0.816 -- -- -- 0.312 21.4 -- -- -- --
91.58 0.446 10.1 -- -- 0.667 -- -- 0.109 -- 6.739 47520 -- --
108.8 0.487 10 -- -- -- -- -- 0.309 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.44 radiation 10.0 43200 > th dose independent rect. 9 1
7 26.37 radiation 10.0 43200 < th dose dependent rect. 10 1
10 26.74 precipitation 0.1 43200 > th dose dependent rect. 6 14
11 26.74 precipitation 0.1 43200 > th dose dependent rect. 3 21
13 26.76 precipitation 0.1 43200 > th dose dependent rect. 5 19
19 26.78 precipitation 0.1 43200 > th dose dependent rect. 21 23
20 26.79 precipitation 0.1 43200 > th dose independent rect. 6 14
21 26.79 precipitation 0.1 43200 > th dose dependent sin 0 NA
24 26.80 precipitation 0.1 43200 < th dose independent rect. 6 14
25 26.80 precipitation 0.1 43200 > th dose independent rect. 3 21
26 26.80 precipitation 0.1 43200 < th dose independent rect. 3 21
28 26.80 precipitation 0.1 43200 < th dose dependent rect. 6 14
29 26.80 precipitation 0.1 43200 < th dose dependent rect. 3 21
30 26.80 precipitation 0.1 43200 > th dose dependent rect. 5 23
31 26.80 precipitation 0.1 43200 > th dose dependent rect. 9 23
32 26.80 precipitation 0.1 43200 > th dose dependent rect. 12 23
36 26.81 precipitation 0.1 43200 > th dose dependent rect. 12 20
39 26.81 precipitation 0.1 43200 > th dose dependent rect. 19 23
41 26.82 precipitation 0.1 43200 > th dose dependent no NA NA
47 26.82 precipitation 0.1 43200 > th dose dependent rect. 14 23
61 26.84 precipitation 0.1 43200 > th dose independent rect. 5 19
62 26.84 precipitation 0.1 43200 < th dose independent rect. 5 19
64 26.84 precipitation 0.1 43200 < th dose independent rect. 12 20
67 26.84 precipitation 0.1 43200 < th dose dependent rect. 5 19
69 26.84 precipitation 0.1 43200 < th dose dependent rect. 12 20
72 26.84 precipitation 0.1 43200 > th dose dependent rect. 23 23
74 26.85 precipitation 0.1 43200 > th dose independent rect. 12 20
77 26.85 temperature 30.0 43200 > th dose dependent rect. 18 1
96 26.86 precipitation 0.1 43200 > th dose dependent rect. 21 21
116 26.88 wind 1.0 43200 > th dose independent rect. 3 2
117 26.88 wind 1.0 43200 < th dose independent rect. 17 3
118 26.88 precipitation 0.1 43200 > th dose independent rect. 6 12
119 26.88 precipitation 0.1 43200 > th dose independent rect. 15 16
120 26.88 precipitation 0.1 43200 < th dose independent rect. 15 16
131 26.88 precipitation 0.1 43200 < th dose dependent rect. 15 16
143 26.89 precipitation 0.1 43200 < th dose independent rect. 6 12
150 26.89 precipitation 0.1 43200 < th dose dependent rect. 6 12
152 26.89 precipitation 0.1 43200 > th dose dependent rect. 14 18
165 26.90 precipitation 0.1 43200 > th dose independent rect. 19 23
166 26.90 precipitation 0.1 43200 < th dose independent rect. 19 23
174 26.90 precipitation 0.1 43200 < th dose dependent rect. 19 23
195 26.92 precipitation 0.1 43200 > th dose independent rect. 15 23
196 26.92 precipitation 0.1 43200 < th dose independent rect. 15 23
201 26.92 precipitation 0.1 43200 < th dose dependent rect. 15 23
207 26.93 precipitation 0.1 43200 > th dose independent rect. 9 23
208 26.93 precipitation 0.1 43200 < th dose independent rect. 9 23
214 26.93 precipitation 0.1 43200 < th dose dependent rect. 9 23
222 26.94 precipitation 0.1 43200 > th dose dependent rect. 18 13
230 26.95 precipitation 0.1 43200 > th dose independent no NA NA
231 26.95 precipitation 0.1 43200 < th dose independent no NA NA
232 26.95 wind 1.0 43200 > th dose independent rect. 17 3
247 26.95 precipitation 0.1 43200 > th dose independent rect. 21 23
249 26.95 precipitation 0.1 43200 > th dose dependent sin 11 NA
251 26.95 precipitation 0.1 43200 < th dose dependent no NA NA
267 26.96 precipitation 0.1 43200 > th dose independent rect. 5 23
269 26.96 precipitation 0.1 43200 > th dose independent rect. 23 23
270 26.96 precipitation 0.1 43200 < th dose independent rect. 5 23
274 26.96 precipitation 0.1 43200 < th dose independent rect. 21 23
275 26.96 precipitation 0.1 43200 < th dose independent rect. 23 23
282 26.96 precipitation 0.1 43200 < th dose dependent rect. 5 23
286 26.96 precipitation 0.1 43200 < th dose dependent rect. 21 23
287 26.96 precipitation 0.1 43200 < th dose dependent rect. 23 23
297 26.97 precipitation 0.1 43200 > th dose dependent rect. 19 11
345 27.00 precipitation 0.1 43200 > th dose independent sin 0 NA
346 27.00 precipitation 0.1 43200 < th dose independent sin 0 NA
350 27.00 precipitation 0.1 43200 < th dose dependent sin 0 NA
367 27.02 precipitation 0.1 43200 > th dose independent sin 12 NA
368 27.02 precipitation 0.1 43200 < th dose independent sin 12 NA
373 27.02 precipitation 0.1 43200 < th dose dependent sin 12 NA
382 27.04 precipitation 0.1 43200 < th dose independent rect. 19 11
384 27.04 precipitation 0.1 43200 < th dose dependent rect. 19 11
388 27.05 precipitation 0.1 43200 > th dose independent rect. 19 11
424 27.07 temperature 30.0 14400 > th dose dependent rect. 17 17
427 27.07 precipitation 0.1 43200 > th dose dependent rect. 24 19
434 27.08 temperature 30.0 43200 > th dose independent rect. 18 1
462 27.09 temperature 30.0 43200 < th dose independent rect. 18 2
483 27.10 temperature 30.0 43200 < th dose independent rect. 18 6
484 27.10 temperature 30.0 43200 < th dose independent rect. 18 10
486 27.10 temperature 30.0 43200 < th dose independent rect. 18 13
589 27.18 radiation 40.0 14400 > th dose independent rect. 14 1
600 27.19 temperature 25.0 14400 > th dose dependent rect. 22 1
604 27.20 wind 1.0 43200 > th dose independent rect. 24 5
605 27.20 temperature 30.0 14400 < th dose independent rect. 17 17
650 27.23 temperature 30.0 14400 > th dose independent rect. 17 17
668 27.24 temperature 30.0 14400 > th dose dependent sin 10 NA
696 27.25 wind 1.0 43200 < th dose independent rect. 3 2
697 27.25 precipitation 0.1 43200 < th dose independent rect. 22 2
701 27.25 precipitation 0.1 43200 < th dose dependent rect. 22 2
733 27.28 precipitation 0.1 43200 > th dose independent rect. 22 2
752 27.28 precipitation 0.1 43200 > th dose dependent rect. 22 2
813 27.34 wind 1.0 43200 > th dose independent rect. 24 7
888 27.40 wind 1.0 43200 < th dose independent rect. 24 5
928 27.43 wind 1.0 43200 < th dose dependent rect. 3 8
944 27.45 temperature 30.0 14400 < th dose independent sin 10 NA
956 27.46 temperature 30.0 14400 > th dose independent sin 10 NA
966 27.47 temperature 30.0 14400 < th dose independent rect. 9 1
968 27.47 precipitation 0.1 43200 < th dose independent rect. 7 9
975 27.47 temperature 30.0 14400 > th dose dependent no NA NA
977 27.47 precipitation 0.1 43200 > th dose dependent rect. 9 9
978 27.47 precipitation 0.1 43200 < th dose dependent rect. 7 9
979 27.47 temperature 30.0 14400 > th dose dependent rect. 9 10