Os09g0120800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cation-transporting ATPase.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0120800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Cation-transporting ATPase.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.57 | 0.341 | 11.1 | -1.26 | 0.599 | -1.03 | 0.785 | -0.872 | 0.328 | 3.77 | 23.55 | 126 | -- | -- |
| 53.69 | 0.341 | 11.1 | -1.3 | 0.603 | -0.871 | 0.713 | -- | 0.308 | 3.73 | 24.05 | 126 | -- | -- |
| 54.06 | 0.342 | 11.1 | -1.33 | 0.599 | -0.964 | -- | -0.388 | 0.313 | 3.9 | 23.6 | 130 | -- | -- |
| 54.27 | 0.343 | 11.1 | -1.35 | 0.592 | -0.892 | -- | -- | 0.311 | 3.91 | 23.79 | 120 | -- | -- |
| 70.51 | 0.391 | 11.1 | -1.3 | -- | -0.827 | -- | -0.405 | 0.323 | -- | 23.7 | 1325 | -- | -- |
| 63.98 | 0.375 | 11.1 | -1.16 | 0.492 | -- | 0.571 | -- | 0.443 | 4.34 | -- | -- | -- | -- |
| 64.86 | 0.377 | 11.1 | -1.16 | 0.497 | -- | -- | -- | 0.44 | 4.43 | -- | -- | -- | -- |
| 70.33 | 0.391 | 11.1 | -1.36 | -- | -0.732 | -- | -- | 0.293 | -- | 25.4 | 1225 | -- | -- |
| 98.7 | 0.465 | 11.1 | -- | 0.507 | -0.361 | -- | -- | 0.53 | 4.15 | 23.1 | 44 | -- | -- |
| 78.08 | 0.413 | 11.1 | -1.14 | -- | -- | -- | -- | 0.453 | -- | -- | -- | -- | -- |
| 100.48 | 0.469 | 11.1 | -- | 0.475 | -- | -- | -- | 0.57 | 4.48 | -- | -- | -- | -- |
| 110.75 | 0.49 | 11.1 | -- | -- | 0.396 | -- | -- | 0.598 | -- | 16.8 | 3637 | -- | -- |
| 112.54 | 0.495 | 11.1 | -- | -- | -- | -- | -- | 0.58 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.57 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 9 | 21 |
| 4 | 52.88 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 12 | 53.10 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 16 | 53.13 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 18 | 53.14 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 21 | 53.18 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 22 | 53.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 24 | 53.20 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 25 | 53.20 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 26 | 53.20 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 27 | 53.20 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 30 | 53.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 32 | 53.22 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 33 | 53.24 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 34 | 53.25 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 36 | 53.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 37 | 53.32 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 20 |
| 47 | 53.38 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 48 | 53.38 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 67 | 53.47 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 17 |
| 73 | 53.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 82 | 53.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 88 | 53.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 89 | 53.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 97 | 53.59 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 101 | 53.63 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 110 | 53.68 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 143 | 53.83 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 145 | 53.83 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 17 |
| 151 | 53.85 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 153 | 53.85 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 154 | 53.85 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 164 | 53.88 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 172 | 53.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 183 | 53.95 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 186 | 53.96 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 187 | 53.96 | temperature | 20.0 | 90 | > th | dose independent | rect. | 20 | 17 |
| 199 | 53.98 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 8 |
| 200 | 53.99 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 17 |
| 207 | 54.02 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 219 | 54.04 | temperature | 20.0 | 30 | > th | dose independent | rect. | 18 | 21 |
| 226 | 54.06 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 236 | 54.09 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 238 | 54.09 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 239 | 54.10 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 19 |
| 259 | 54.15 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 264 | 54.15 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 331 | 54.31 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 337 | 54.32 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 338 | 54.33 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 339 | 54.33 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 356 | 54.35 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 359 | 54.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 363 | 54.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 375 | 54.37 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 507 | 54.59 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 23 |
| 516 | 54.60 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 544 | 54.63 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 15 |
| 567 | 54.67 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 579 | 54.68 | temperature | 25.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 588 | 54.69 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 725 | 54.89 | temperature | 25.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 736 | 54.90 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 760 | 54.93 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 764 | 54.94 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 781 | 54.96 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 822 | 55.00 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 831 | 55.01 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 886 | 55.07 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 4 |
| 907 | 55.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 909 | 55.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 917 | 55.10 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 932 | 55.12 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 943 | 55.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 949 | 55.13 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 953 | 55.14 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 989 | 55.18 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |