Os09g0103400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0103400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.74 | 0.417 | 7.24 | 0.101 | 1.62 | 0.799 | 0.203 | -0.144 | -0.355 | 17.8 | 20.1 | 23 | -- | -- |
| 78.76 | 0.413 | 7.23 | 0.119 | 1.61 | 0.8 | 0.183 | -- | -0.351 | 17.8 | 20.1 | 22 | -- | -- |
| 78.83 | 0.414 | 7.24 | 0.113 | 1.61 | 0.804 | -- | -0.0564 | -0.351 | 17.8 | 20.1 | 22 | -- | -- |
| 78.83 | 0.414 | 7.23 | 0.123 | 1.62 | 0.8 | -- | -- | -0.348 | 17.8 | 20.1 | 22 | -- | -- |
| 162.88 | 0.594 | 7.25 | -0.272 | -- | 1.95 | -- | -1.57 | -0.465 | -- | 24.2 | 281 | -- | -- |
| 87.84 | 0.439 | 7.2 | 0.294 | 1.82 | -- | 0.436 | -- | -0.213 | 17.3 | -- | -- | -- | -- |
| 88.31 | 0.44 | 7.2 | 0.293 | 1.83 | -- | -- | -- | -0.211 | 17.3 | -- | -- | -- | -- |
| 165.04 | 0.598 | 7.23 | -0.0712 | -- | 1.85 | -- | -- | -0.445 | -- | 24.19 | 272 | -- | -- |
| 79.2 | 0.414 | 7.24 | -- | 1.6 | 0.846 | -- | -- | -0.365 | 17.8 | 20 | 22 | -- | -- |
| 262.19 | 0.757 | 7.18 | 0.23 | -- | -- | -- | -- | -0.256 | -- | -- | -- | -- | -- |
| 90.57 | 0.445 | 7.21 | -- | 1.82 | -- | -- | -- | -0.243 | 17.3 | -- | -- | -- | -- |
| 165.17 | 0.599 | 7.22 | -- | -- | 1.83 | -- | -- | -0.43 | -- | 24.2 | 272 | -- | -- |
| 263.59 | 0.758 | 7.19 | -- | -- | -- | -- | -- | -0.282 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.71 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 3 | 66.50 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 4 | 66.91 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 6 | 67.50 | temperature | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 9 | 67.78 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 20 | 68.81 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 33 | 69.25 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 7 |
| 42 | 69.46 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 79 | 70.34 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 103 | 70.76 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 155 | 71.48 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 237 | 72.53 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 289 | 73.07 | temperature | 30.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 293 | 73.16 | temperature | 15.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 305 | 73.26 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 4 |
| 306 | 73.26 | temperature | 25.0 | 30 | < th | dose dependent | sin | 1 | NA |
| 348 | 73.47 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 15 |
| 352 | 73.50 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 353 | 73.52 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 372 | 73.60 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 436 | 74.00 | temperature | 20.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 453 | 74.08 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 500 | 74.43 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 503 | 74.44 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 15 |
| 509 | 74.46 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 16 |
| 511 | 74.48 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 23 |
| 512 | 74.48 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 518 | 74.51 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 521 | 74.53 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 523 | 74.53 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 535 | 74.58 | radiation | 1.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 555 | 74.67 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 8 |
| 563 | 74.69 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 4 |
| 565 | 74.69 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 580 | 74.77 | wind | 9.0 | 14400 | > th | dose independent | rect. | 19 | 16 |
| 584 | 74.79 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 611 | 74.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 632 | 75.02 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 16 |
| 650 | 75.09 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 14 |
| 658 | 75.14 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 659 | 75.14 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 5 |
| 668 | 75.18 | wind | 9.0 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 669 | 75.18 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 672 | 75.18 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 674 | 75.18 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 675 | 75.18 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 677 | 75.18 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 683 | 75.19 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 5 |
| 696 | 75.22 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 11 | 7 |
| 700 | 75.22 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 11 | 7 |
| 701 | 75.23 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 2 |
| 704 | 75.23 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 2 |
| 706 | 75.24 | temperature | 20.0 | 270 | > th | dose independent | sin | 5 | NA |
| 711 | 75.25 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 2 |
| 717 | 75.26 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 721 | 75.28 | temperature | 20.0 | 270 | < th | dose independent | sin | 5 | NA |
| 724 | 75.28 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 10 |
| 727 | 75.29 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 11 | 7 |
| 736 | 75.31 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 10 |
| 739 | 75.32 | radiation | 1.0 | 270 | > th | dose independent | sin | 1 | NA |
| 761 | 75.37 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 20 |
| 762 | 75.37 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 775 | 75.42 | radiation | 1.0 | 270 | < th | dose independent | sin | 1 | NA |
| 779 | 75.44 | wind | 9.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 798 | 75.50 | wind | 9.0 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 815 | 75.55 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 6 |
| 844 | 75.63 | wind | 9.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 864 | 75.67 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 867 | 75.68 | wind | 9.0 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 892 | 75.75 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 917 | 75.80 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 13 |
| 927 | 75.82 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 15 |
| 937 | 75.85 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 938 | 75.85 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 3 |