Os09g0101200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HAT dimerisation domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0101200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : HAT dimerisation domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 194.13 | 0.655 | 1.98 | 8.19 | 1.12 | -109 | 0.685 | 660 | 0.397 | 16.5 | 994.9 | 678 | -- | -- |
| 222.13 | 0.699 | 3.3 | 0.229 | 1.07 | -1.3 | 0.525 | -- | 0.387 | 16.5 | 994.9 | 678 | -- | -- |
| 194.84 | 0.65 | 1.98 | 8.11 | 1.07 | -112 | -- | 681 | 0.406 | 16.5 | 994.8 | 667 | -- | -- |
| 221.06 | 0.692 | 3.31 | 0.233 | 1.09 | -1.24 | -- | -- | 0.374 | 16.6 | 995.6 | 339 | -- | -- |
| 258.62 | 0.749 | 2.08 | 7.47 | -- | -111 | -- | 673 | 0.372 | -- | 994.5 | 688 | -- | -- |
| 223.84 | 0.701 | 3.3 | 0.221 | 1.06 | -- | 0.481 | -- | 0.39 | 16.5 | -- | -- | -- | -- |
| 224.46 | 0.702 | 3.3 | 0.224 | 1.06 | -- | -- | -- | 0.393 | 16.6 | -- | -- | -- | -- |
| 282.98 | 0.783 | 3.29 | 0.199 | -- | -0.755 | -- | -- | 0.363 | -- | 995.6 | 363 | -- | -- |
| 222.6 | 0.695 | 3.31 | -- | 1.08 | -1.18 | -- | -- | 0.359 | 16.6 | 995.6 | 334 | -- | -- |
| 284.31 | 0.788 | 3.29 | 0.183 | -- | -- | -- | -- | 0.365 | -- | -- | -- | -- | -- |
| 225.78 | 0.703 | 3.31 | -- | 1.06 | -- | -- | -- | 0.368 | 16.6 | -- | -- | -- | -- |
| 283.97 | 0.785 | 3.3 | -- | -- | -0.698 | -- | -- | 0.338 | -- | 995.4 | 397 | -- | -- |
| 285.19 | 0.788 | 3.3 | -- | -- | -- | -- | -- | 0.345 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 190.18 | atmosphere | 995 | 720 | < th | dose dependent | rect. | 18 | 22 |
| 2 | 190.83 | atmosphere | 995 | 720 | < th | dose independent | rect. | 18 | 22 |
| 3 | 191.03 | atmosphere | 995 | 720 | < th | dose independent | rect. | 14 | 1 |
| 44 | 191.03 | atmosphere | 995 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 85 | 191.57 | atmosphere | 995 | 720 | < th | dose independent | sin | 7 | NA |
| 87 | 192.48 | temperature | 25 | 90 | > th | dose independent | rect. | 1 | 1 |
| 88 | 192.66 | atmosphere | 995 | 720 | < th | dose dependent | sin | 7 | NA |
| 89 | 193.76 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 98 | 194.47 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 1 | 1 |
| 106 | 194.47 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 153 | 197.04 | atmosphere | 995 | 720 | > th | dose independent | sin | 1 | NA |
| 165 | 197.89 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 12 | 3 |
| 166 | 197.91 | atmosphere | 995 | 720 | > th | dose independent | no | NA | NA |
| 192 | 198.69 | humidity | 60 | 270 | > th | dose independent | rect. | 12 | 3 |
| 200 | 199.22 | atmosphere | 995 | 720 | < th | dose independent | no | NA | NA |
| 415 | 199.39 | humidity | 60 | 270 | > th | dose independent | rect. | 11 | 5 |
| 420 | 199.65 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 12 | 5 |
| 424 | 199.97 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 12 | 3 |
| 435 | 200.63 | atmosphere | 995 | 720 | < th | dose dependent | no | NA | NA |
| 672 | 200.81 | humidity | 60 | 270 | > th | dose independent | rect. | 22 | 18 |
| 683 | 201.17 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 684 | 201.21 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 10 | 7 |
| 709 | 201.41 | atmosphere | 1000 | 90 | > th | dose dependent | rect. | 12 | 6 |
| 721 | 201.78 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 724 | 201.87 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 21 | 7 |
| 729 | 201.93 | atmosphere | 995 | 720 | > th | dose independent | sin | 13 | NA |
| 755 | 202.66 | humidity | 50 | 270 | > th | dose dependent | rect. | 12 | 3 |
| 760 | 202.87 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 12 | 6 |
| 814 | 204.34 | atmosphere | 995 | 270 | > th | dose independent | rect. | 9 | 8 |
| 818 | 204.37 | atmosphere | 995 | 270 | > th | dose independent | rect. | 21 | 20 |
| 831 | 204.57 | atmosphere | 995 | 270 | > th | dose independent | rect. | 11 | 16 |
| 839 | 204.68 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 843 | 204.81 | atmosphere | 995 | 270 | > th | dose independent | rect. | 22 | 18 |
| 868 | 205.15 | humidity | 50 | 10 | > th | dose dependent | rect. | 12 | 6 |
| 878 | 205.29 | humidity | 50 | 270 | > th | dose independent | rect. | 12 | 15 |
| 896 | 205.48 | atmosphere | 995 | 90 | > th | dose independent | rect. | 1 | 16 |
| 906 | 205.62 | atmosphere | 995 | 720 | < th | dose independent | rect. | 17 | 2 |
| 980 | 206.10 | atmosphere | 995 | 720 | < th | dose dependent | rect. | 17 | 2 |