BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0101200 Os09g0101200|Os09g0101200
         (501 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G42170.1  | chr3:14321838-14323928 FORWARD LENGTH=697          159   3e-39
AT1G18560.1  | chr1:6385614-6388005 FORWARD LENGTH=691             88   8e-18

>AT3G42170.1 | chr3:14321838-14323928 FORWARD LENGTH=697
          Length = 696

 Score =  159 bits (402), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 208/445 (46%), Gaps = 36/445 (8%)

Query: 42  DFELKKFIISFKQISYPHTSYAVQDGLTSCLIEWDLIDKLFTLTLDNASVNDKAAKELRN 101
           D++++K +++    SYP    A+   + +C+ EW L  KLF +T ++ + N  A + +R 
Sbjct: 259 DWKIQKKLLNVLMESYPEADEALSLAVANCVSEWGLEGKLFNVTFNHPASN-SAVENIRP 317

Query: 102 TMGAE--MFFKAEHFHVRCNAHILNIMVQNGTRLITSAIANVRDIVKTITSIPSPMQIFN 159
            +  +       +     C A     + ++        I N+RD VK + +  S  + F 
Sbjct: 318 QLCIKNPGILDGQLVIGNCVARTFGSLAKDVLEKGKDVIKNIRDSVKHVKTSESHEERFT 377

Query: 160 SVVQRMGLKTKSRLVVDVPHRWNATYDMIHDSLAYKAAINIY--ATEQHHETPSDSDWGK 217
            + +++ + ++  L +D   +WN TY M+  +   K   +    A   + + PS  DW  
Sbjct: 378 ELKEQLQVPSEKVLSLDDQTQWNTTYMMLVAASELKEVFSCLDTADPDYKKPPSAEDWRH 437

Query: 218 AESLHGFLQAFSDATKTFSTDRHPTSHLFLKMVLAIRDVLLDERWEQDQLLQEMANAMYV 277
            E+L  FL+   +A  T  +  +P++  F   V   +  L      +D  +  +A  M  
Sbjct: 438 VEALCTFLKPLFEAVSTLQSTGNPSAVTFFHEVWKTQSDLSRAIAGEDPFVTGIAKTMQE 497

Query: 278 KFQKYWNVPNIVLLVVAVMDPTQKIDYLRFYFYTI-GQNVEEKIKELRTCLNKYYLEYEK 336
           K  KYW   ++VL +  VMDP  K+  + F F  I G++  + IK +   +++ + EY  
Sbjct: 498 KVDKYWRDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKNIKTVDDGIHELFTEY-- 555

Query: 337 IAGSCELPTFIERDEHILANDPXXXXXXXXXXXKRCIELAFAHFASQNIEMHTKKSELDN 396
           +A      T  E  +    +D                +        QN+     KSELD 
Sbjct: 556 MALPSPQNTTSEGGKADGLSD---------------FDTYIMETTGQNL-----KSELDQ 595

Query: 397 YLED---PRVHYNSDENFDVLSWWKRNADVYPTLSLMARDFLAIPVSTVSSESAFSAAGR 453
           YL++   PRV     + FDVL WWK+N   YPTLS MARD L+IPVS  + +  F    R
Sbjct: 596 YLDETLLPRV-----QEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPR 650

Query: 454 LLGKDRTSMSPETLEASICLKDWII 478
            + + +TS+ PET+EA IC ++W++
Sbjct: 651 EMDEYKTSLRPETVEALICAREWLL 675



>AT1G18560.1 | chr1:6385614-6388005 FORWARD LENGTH=691
          Length = 690

 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 98/455 (21%), Positives = 184/455 (40%), Gaps = 53/455 (11%)

Query: 41  EDFELKKFIISFKQISYPHTSYAVQDGLTSCLIEWDLIDKLFTLTLDNASVNDKAAKELR 100
           E++   + ++   +I YP     + + L   L  + + D++   T DN+     A   L+
Sbjct: 230 ENWSSHRLLLDICRIPYPSGGSEIYNSLLKVLKTYAIEDRILCCTHDNSENAIHACHSLK 289

Query: 101 NTMGAEMFFKAEHFHVRCNAHILNIMVQNGTRLITSAIANVRDIVKTITSIPSPMQIFNS 160
                +        ++ C A  LN ++  G   I   I+ VR+  + + +     ++ + 
Sbjct: 290 EYFDGQKVLP--FCYIPCAAQTLNDIIDEGLATIKPIISKVREFTQELNA---STELSDD 344

Query: 161 VVQRMGLKTKS--RLVVDVPHRWNATYDMIHDSLAYKAAINIYATEQHHETP-------S 211
            +Q      +   +L +D   RW+  Y M++  +  KA+ ++ +  + +E         S
Sbjct: 345 FIQLTTAYQEGNWKLPIDASSRWSGNYQMVN--ILCKASKSLDSVIRKNEDALENRMMLS 402

Query: 212 DSDWGKAESLHGFLQ--AFSDATKTFSTDRHPTSHLFLKMVLAIRDVL--LDERWEQDQL 267
             +      +H +L   +F   T    T++  T  L L  +  I +++    +       
Sbjct: 403 SVEKNAVTIVHNYLDLDSFHKTTNDMCTNKDLTVGLALLFMDNISEMITTCQKSCHNPDW 462

Query: 268 LQEMANAMYVKFQKY-WNVPNIVLLVVAVMDPTQKIDYLRFYFYTIGQNVEEKIKELRTC 326
           L+  A +M  K + Y   V N+   + A++DP  K +Y+     TI  N+E  I E R+ 
Sbjct: 463 LRTCAESMAQKARSYNTQVCNVFTYITAILDPRIKTEYIP---ETI--NLESYIDEARSH 517

Query: 327 LNKYYLEYEKIAGSCELPTFIERDEHILANDPXXXXXXXXXXXKRCIELAFAHFASQNIE 386
             + Y      +         E DE                       ++FA    + I 
Sbjct: 518 FIRNYSSSHFTSSMTSGYRPQEVDEG-------------------GGNISFA----EEIA 554

Query: 387 MHTKKSELDNYLEDPRVHYNSDE----NFDVLSWWKRNADVYPTLSLMARDFLAIPVSTV 442
              ++  + N + D    Y S+       DVL WWK N+  YP LS MARDFLA+  ++ 
Sbjct: 555 RRKRRGSMSNNVVDELTQYLSESIVPMQTDVLDWWKVNSGRYPRLSNMARDFLAVQATSA 614

Query: 443 SSESAFSAAGRLLGKDRTSMSPETLEASICLKDWI 477
           + E  F   G  + K +  M  ++ ++ IC++ WI
Sbjct: 615 APEEIFCGKGEEIDKQKYCMPHDSTQSVICIRSWI 649



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.134    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,654,004
Number of extensions: 422751
Number of successful extensions: 1032
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1027
Number of HSP's successfully gapped: 4
Length of query: 501
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 398
Effective length of database: 8,282,721
Effective search space: 3296522958
Effective search space used: 3296522958
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)