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Os08g0567000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.6 (0.014) R2 : 0.0821
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.188 (0.0294) R2dN8 : 0.106 R2N8 : 0.0821
σ : 0.263
deviance : 31.79
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
15.99 0.188 13.5 0.056 0.43 -0.596 -0.0386 -0.184 0.266 20.1 15.2 12 -- --
16.01 0.186 13.5 0.0827 0.431 -0.587 -0.022 -- 0.273 20.1 15.62 14 -- --
15.99 0.186 13.5 0.0549 0.431 -0.597 -- -0.19 0.265 20.1 15.2 14 -- --
16.01 0.186 13.5 0.0832 0.431 -0.59 -- -- 0.273 20.1 15.62 14 -- --
25.94 0.239 13.5 0.0681 -- -0.623 -- -0.0834 0.265 -- 15.01 9 -- --
19.7 0.208 13.6 -0.0374 0.452 -- 0.0161 -- 0.185 21.6 -- -- -- --
19.7 0.208 13.6 -0.038 0.452 -- -- -- 0.185 21.6 -- -- -- --
25.94 0.238 13.5 0.0772 -- -0.587 -- -- 0.268 -- 16.35 5 -- --
16.18 0.187 13.5 -- 0.428 -0.53 -- -- 0.26 20.2 16.52 12 -- --
31.76 0.263 13.6 -0.0344 -- -- -- -- 0.184 -- -- -- -- --
19.74 0.208 13.6 -- 0.451 -- -- -- 0.189 21.6 -- -- -- --
26.08 0.238 13.5 -- -- -0.538 -- -- 0.258 -- 17.2 2 -- --
31.79 0.263 13.6 -- -- -- -- -- 0.188 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 15.30 temperature 15 10 > th dose dependent rect. 23 23
7 15.73 temperature 10 720 > th dose dependent rect. 23 14
9 15.75 temperature 15 720 > th dose dependent rect. 23 12
12 15.80 temperature 15 720 > th dose dependent sin 7 NA
13 15.80 temperature 10 720 > th dose dependent rect. 20 15
18 15.83 temperature 15 270 > th dose dependent rect. 17 23
21 15.84 temperature 10 720 > th dose dependent rect. 23 16
22 15.85 temperature 10 720 > th dose dependent rect. 23 8
27 15.86 temperature 15 270 > th dose dependent sin 4 NA
33 15.86 temperature 20 10 > th dose dependent rect. 23 21
37 15.87 temperature 10 270 > th dose dependent rect. 19 23
46 15.89 temperature 30 270 < th dose dependent rect. 1 20
50 15.90 temperature 30 270 < th dose dependent rect. 24 22
51 15.90 temperature 10 270 > th dose dependent rect. 6 23
52 15.90 temperature 20 10 > th dose dependent rect. 10 23
66 15.93 temperature 20 10 > th dose dependent rect. 21 23
78 15.95 temperature 30 720 < th dose dependent rect. 22 15
81 15.95 temperature 20 30 > th dose dependent rect. 23 19
89 15.97 temperature 30 720 < th dose dependent sin 7 NA
93 15.97 temperature 30 720 < th dose dependent rect. 22 13
117 16.00 temperature 15 10 > th dose dependent no NA NA
135 16.03 temperature 15 90 > th dose dependent no NA NA
159 16.05 temperature 20 10 > th dose dependent rect. 3 23
162 16.06 temperature 15 90 > th dose dependent sin 0 NA
183 16.07 temperature 20 10 > th dose dependent rect. 1 23
223 16.11 temperature 10 10 > th dose dependent sin 23 NA
230 16.11 temperature 30 270 < th dose dependent rect. 3 16
238 16.11 temperature 20 10 > th dose dependent rect. 6 23
257 16.13 temperature 30 720 < th dose dependent rect. 2 7
317 16.16 temperature 20 10 > th dose dependent rect. 10 19
320 16.16 temperature 20 10 > th dose dependent rect. 8 23
322 16.16 temperature 30 10 < th dose dependent rect. 7 23
337 16.17 temperature 20 10 > th dose dependent rect. 10 21
356 16.18 temperature 30 90 < th dose dependent rect. 5 18
367 16.18 temperature 30 10 < th dose dependent rect. 13 23
369 16.19 temperature 25 720 < th dose dependent rect. 3 4
385 16.19 temperature 30 90 < th dose dependent rect. 11 23
408 16.20 temperature 30 10 < th dose dependent rect. 15 23
409 16.21 temperature 30 10 < th dose dependent no NA NA
433 16.21 temperature 30 10 < th dose dependent rect. 17 23
471 16.23 temperature 30 10 < th dose dependent rect. 5 18
502 16.25 temperature 30 10 < th dose dependent sin 23 NA
529 16.26 temperature 30 90 < th dose dependent sin 0 NA
532 16.26 temperature 20 10 > th dose dependent rect. 1 17
594 16.28 temperature 30 30 < th dose dependent rect. 9 23
607 16.29 temperature 30 10 < th dose dependent rect. 5 16
636 16.30 temperature 20 30 > th dose dependent rect. 3 15
652 16.31 temperature 25 720 < th dose dependent no NA NA
661 16.31 temperature 25 720 < th dose dependent rect. 1 13
672 16.31 temperature 20 10 > th dose dependent rect. 1 21
703 16.33 temperature 20 30 > th dose dependent rect. 21 21
711 16.33 temperature 25 720 < th dose dependent rect. 10 23
784 16.36 temperature 30 10 < th dose dependent rect. 1 23
869 16.39 temperature 20 10 > th dose dependent rect. 3 21
875 16.39 temperature 30 10 < th dose dependent rect. 5 23
905 16.41 temperature 20 1440 > th dose dependent rect. 3 1
940 16.42 temperature 10 1440 > th dose dependent rect. 3 2
958 16.42 temperature 20 10 > th dose dependent rect. 1 19
967 16.43 temperature 25 10 > th dose independent rect. 1 17