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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0566000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : TENA/THI-4 protein domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.9 (0.0257) R2 : 0.0504
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.267 (0.0542) R2dN8 : 0.0651 R2N8 : 0.0504
σ : 0.485
deviance : 107.83
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
82.97 0.428 9.81 0.71 0.171 -0.714 -0.457 1.26 0.0854 2.01 25.7 663 -- --
85.79 0.431 9.84 0.413 0.227 -0.715 -0.308 -- 0.0206 2.47 25.7 668 -- --
83.7 0.426 9.81 0.713 0.161 -0.697 -- 1.22 0.0828 2.44 25.6 647 -- --
85.81 0.431 9.84 0.392 0.175 -0.615 -- -- -0.0136 3.33 25.6 660 -- --
84.19 0.427 9.81 0.69 -- -0.653 -- 1.19 0.0942 -- 25.54 502 -- --
97.89 0.464 9.89 0.195 0.41 -- -0.268 -- -0.254 6.53 -- -- -- --
98.05 0.464 9.89 0.192 0.409 -- -- -- -0.252 6.66 -- -- -- --
86.65 0.434 9.85 0.37 -- -0.613 -- -- -0.0134 -- 25.51 540 -- --
89.19 0.44 9.86 -- 0.211 -0.532 -- -- -0.102 4.04 25.51 653 -- --
106.76 0.483 9.9 0.202 -- -- -- -- -0.244 -- -- -- -- --
99.02 0.465 9.89 -- 0.411 -- -- -- -0.274 6.63 -- -- -- --
90.14 0.442 9.86 -- -- -0.56 -- -- -0.0711 -- 25.5 537 -- --
107.83 0.485 9.9 -- -- -- -- -- -0.267 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 77.73 temperature 10 270 > th dose dependent rect. 7 21
3 77.86 temperature 15 90 > th dose dependent rect. 9 20
17 79.52 temperature 20 720 > th dose dependent rect. 16 3
34 80.11 radiation 20 14400 < th dose independent rect. 1 5
41 80.39 temperature 20 90 > th dose dependent rect. 23 6
45 80.64 temperature 30 270 < th dose dependent rect. 15 16
49 80.78 radiation 10 43200 < th dose dependent rect. 1 1
51 80.82 temperature 25 720 > th dose independent rect. 16 3
52 80.83 temperature 30 30 < th dose dependent rect. 5 19
61 81.00 temperature 30 90 < th dose dependent rect. 17 16
62 81.00 temperature 30 270 < th dose dependent rect. 11 21
84 81.39 temperature 25 720 < th dose independent rect. 9 15
86 81.42 temperature 25 720 > th dose independent rect. 7 18
98 81.59 radiation 1 720 < th dose dependent rect. 16 8
113 81.75 temperature 10 720 > th dose dependent rect. 15 10
127 81.91 temperature 20 270 > th dose dependent rect. 23 2
133 81.98 temperature 30 720 < th dose dependent rect. 10 13
145 82.03 temperature 20 270 > th dose dependent rect. 21 6
149 82.05 temperature 30 30 < th dose dependent rect. 1 23
173 82.22 radiation 1 720 < th dose independent rect. 16 8
178 82.23 temperature 30 10 < th dose dependent rect. 14 10
185 82.25 temperature 20 720 > th dose dependent rect. 15 10
201 82.33 radiation 1 720 > th dose independent rect. 16 3
246 82.51 temperature 25 720 > th dose independent sin 19 NA
248 82.51 radiation 1 720 < th dose dependent rect. 4 20
255 82.56 temperature 25 720 < th dose independent sin 19 NA
266 82.61 temperature 25 720 > th dose dependent rect. 15 19
311 82.75 temperature 20 720 > th dose dependent sin 18 NA
325 82.80 temperature 10 720 > th dose dependent rect. 13 14
361 82.91 radiation 1 720 < th dose dependent rect. 8 16
370 82.95 temperature 25 720 < th dose independent rect. 4 20
386 83.00 temperature 30 10 < th dose dependent rect. 12 12
429 83.12 temperature 20 90 > th dose independent rect. 9 20
430 83.12 temperature 30 720 < th dose dependent sin 19 NA
434 83.14 temperature 25 720 > th dose dependent sin 14 NA
463 83.20 temperature 25 720 > th dose independent rect. 13 12
475 83.22 temperature 25 90 > th dose independent rect. 24 2
495 83.28 temperature 30 720 < th dose dependent rect. 19 2
505 83.30 temperature 10 720 > th dose dependent rect. 7 12
519 83.32 radiation 1 720 < th dose independent rect. 8 16
529 83.33 radiation 1 720 > th dose independent rect. 7 12
605 83.49 temperature 10 720 > th dose dependent rect. 7 14
612 83.52 radiation 40 4320 < th dose dependent rect. 1 4
616 83.53 temperature 25 90 > th dose independent rect. 23 4
713 83.72 radiation 1 720 < th dose dependent rect. 1 23
723 83.75 temperature 30 720 < th dose dependent rect. 17 5
767 83.82 temperature 30 720 < th dose dependent rect. 5 19
862 84.00 radiation 1 720 < th dose dependent sin 14 NA
867 84.01 radiation 1 720 < th dose independent rect. 4 20
887 84.07 atmosphere 1005 270 > th dose independent rect. 24 1
950 84.21 temperature 30 90 < th dose dependent rect. 4 23
995 84.32 atmosphere 1000 270 > th dose dependent rect. 24 1