Os08g0564900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0564900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.56 | 0.337 | 8.41 | -1.03 | 0.415 | 0.406 | 0.984 | 0.431 | 0.167 | 5 | 21.2 | 10 | -- | -- |
| 52.34 | 0.34 | 8.42 | -1.13 | 0.427 | 0.376 | 0.663 | -- | 0.148 | 5.55 | 21.2 | 14 | -- | -- |
| 52.98 | 0.342 | 8.42 | -1.07 | 0.435 | 0.359 | -- | 0.202 | 0.16 | 6.03 | 21.2 | 10 | -- | -- |
| 53.23 | 0.342 | 8.42 | -1.12 | 0.434 | 0.353 | -- | -- | 0.15 | 6.07 | 21.2 | 13 | -- | -- |
| 62.71 | 0.371 | 8.42 | -1.05 | -- | 0.325 | -- | 0.191 | 0.177 | -- | 21.12 | 12 | -- | -- |
| 59.08 | 0.36 | 8.4 | -1.04 | 0.419 | -- | 0.337 | -- | 0.232 | 6.76 | -- | -- | -- | -- |
| 59.31 | 0.361 | 8.4 | -1.03 | 0.42 | -- | -- | -- | 0.231 | 7.04 | -- | -- | -- | -- |
| 62.93 | 0.371 | 8.43 | -1.1 | -- | 0.321 | -- | -- | 0.167 | -- | 21.12 | 12 | -- | -- |
| 85.02 | 0.429 | 8.39 | -- | 0.412 | 0.207 | -- | -- | 0.303 | 6.61 | 21.2 | 12 | -- | -- |
| 68.58 | 0.387 | 8.41 | -1.02 | -- | -- | -- | -- | 0.239 | -- | -- | -- | -- | -- |
| 87.18 | 0.437 | 8.38 | -- | 0.409 | -- | -- | -- | 0.346 | 7.2 | -- | -- | -- | -- |
| 93.81 | 0.451 | 8.39 | -- | -- | 0.199 | -- | -- | 0.313 | -- | 21.11 | 11 | -- | -- |
| 96.02 | 0.457 | 8.39 | -- | -- | -- | -- | -- | 0.352 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.38 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 19 |
| 81 | 50.84 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 86 | 50.89 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 89 | 50.89 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 92 | 50.91 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 93 | 50.91 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 118 | 51.09 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 123 | 51.13 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 129 | 51.18 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 154 | 51.32 | temperature | 10.0 | 10 | > th | dose dependent | sin | 10 | NA |
| 158 | 51.34 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 9 |
| 159 | 51.34 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 7 |
| 160 | 51.34 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 9 |
| 162 | 51.35 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 167 | 51.36 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 9 |
| 202 | 51.50 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 204 | 51.50 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 217 | 51.55 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 219 | 51.57 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 221 | 51.57 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 222 | 51.58 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 223 | 51.58 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 227 | 51.59 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 231 | 51.60 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 236 | 51.64 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 244 | 51.66 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 4 |
| 245 | 51.66 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 255 | 51.70 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 259 | 51.71 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 264 | 51.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 268 | 51.73 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 7 |
| 281 | 51.76 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 7 |
| 288 | 51.77 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 12 |
| 295 | 51.78 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 10 |
| 299 | 51.79 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 301 | 51.79 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 307 | 51.81 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 4 |
| 312 | 51.82 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 313 | 51.82 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 319 | 51.84 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 13 | 8 |
| 331 | 51.86 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 334 | 51.87 | temperature | 30.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 360 | 51.90 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 362 | 51.90 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 3 |
| 378 | 51.93 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 379 | 51.94 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 410 | 51.99 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 479 | 52.09 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 8 |
| 480 | 52.09 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 15 |
| 522 | 52.16 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 22 | 2 |
| 524 | 52.16 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 22 | 2 |
| 558 | 52.22 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 566 | 52.24 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 603 | 52.28 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 606 | 52.28 | temperature | 25.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 607 | 52.28 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 610 | 52.28 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 5 |
| 665 | 52.36 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 687 | 52.39 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 739 | 52.47 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 749 | 52.48 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 12 |
| 755 | 52.50 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 770 | 52.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 774 | 52.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 776 | 52.52 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 20 | 12 |
| 778 | 52.53 | temperature | 20.0 | 10 | > th | dose independent | sin | 7 | NA |
| 796 | 52.56 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 837 | 52.60 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 844 | 52.61 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 14 |
| 878 | 52.66 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 904 | 52.69 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 908 | 52.70 | wind | 1.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 909 | 52.70 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 916 | 52.71 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 9 |
| 932 | 52.73 | wind | 3.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 933 | 52.73 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 943 | 52.75 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 974 | 52.79 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 982 | 52.79 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |