Os08g0558100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Calcium-binding EF-hand domain containing protein.
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Os08g0558100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Calcium-binding EF-hand domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.99 | 0.443 | 8.27 | 0.403 | 1.48 | -0.653 | 0.261 | 10.6 | -0.2 | 12.8 | 30.76 | 1310 | -- | -- |
| 105.81 | 0.479 | 8.52 | -0.826 | 1.44 | -0.32 | 0.17 | -- | -0.349 | 12.6 | 35.7 | 47520 | -- | -- |
| 89.27 | 0.44 | 8.27 | 0.393 | 1.48 | -0.652 | -- | 10.5 | -0.201 | 12.8 | 30.92 | 1304 | -- | -- |
| 94.47 | 0.453 | 8.53 | -1.57 | 1.44 | 0.608 | -- | -- | -0.446 | 12.7 | 23.1 | 5676 | -- | -- |
| 220.19 | 0.691 | 8.32 | 0.207 | -- | -0.847 | -- | 11.6 | -0.264 | -- | 30.4 | 1654 | -- | -- |
| 108.39 | 0.488 | 8.5 | -1.25 | 1.41 | -- | 0.124 | -- | -0.307 | 12.7 | -- | -- | -- | -- |
| 108.45 | 0.488 | 8.5 | -1.24 | 1.41 | -- | -- | -- | -0.306 | 12.7 | -- | -- | -- | -- |
| 147.92 | 0.569 | 8.6 | -1.68 | -- | 1.99 | -- | -- | -0.646 | -- | 18.9 | 6 | -- | -- |
| 134.27 | 0.54 | 8.43 | -- | 1.39 | -0.626 | -- | -- | 0.0314 | 12.7 | 12.25 | 47434 | -- | -- |
| 232.68 | 0.713 | 8.53 | -1.29 | -- | -- | -- | -- | -0.331 | -- | -- | -- | -- | -- |
| 149.18 | 0.571 | 8.47 | -- | 1.43 | -- | -- | -- | -0.168 | 12.7 | -- | -- | -- | -- |
| 218.52 | 0.691 | 8.54 | -- | -- | 1.58 | -- | -- | -0.405 | -- | 19.96 | 6 | -- | -- |
| 276.81 | 0.777 | 8.5 | -- | -- | -- | -- | -- | -0.188 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.93 | temperature | 20 | 10 | > th | dose dependent | sin | 7 | NA |
| 12 | 82.78 | temperature | 30 | 10 | < th | dose dependent | sin | 6 | NA |
| 23 | 83.61 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 17 |
| 32 | 84.12 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 18 |
| 37 | 84.21 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 66 | 84.92 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 84 | 85.45 | temperature | 20 | 90 | > th | dose dependent | rect. | 22 | 13 |
| 100 | 85.82 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 107 | 85.99 | temperature | 25 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 244 | 88.34 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 253 | 88.53 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 17 |
| 255 | 88.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 281 | 88.75 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 17 |
| 303 | 88.90 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 304 | 88.93 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 315 | 89.02 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 318 | 89.03 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 13 |
| 324 | 89.12 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 330 | 89.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 331 | 89.17 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 340 | 89.22 | temperature | 30 | 1440 | > th | dose dependent | rect. | 17 | 21 |
| 367 | 89.41 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 371 | 89.42 | temperature | 30 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 394 | 89.51 | temperature | 30 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 398 | 89.53 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 15 |
| 403 | 89.54 | temperature | 30 | 1440 | < th | dose independent | rect. | 1 | 12 |
| 466 | 89.68 | temperature | 30 | 1440 | > th | dose dependent | sin | 2 | NA |
| 488 | 89.73 | temperature | 30 | 1440 | > th | dose dependent | rect. | 10 | 9 |
| 529 | 89.76 | temperature | 30 | 1440 | > th | dose dependent | sin | 9 | NA |
| 550 | 89.77 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 739 | 89.86 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 743 | 89.88 | temperature | 30 | 1440 | < th | dose independent | sin | 9 | NA |
| 801 | 89.94 | temperature | 30 | 1440 | > th | dose independent | sin | 9 | NA |
| 863 | 90.21 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 968 | 90.60 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 979 | 90.67 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 985 | 90.71 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 998 | 90.83 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 3 |