Os08g0554100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to MYST1 protein (Fragment).
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Os08g0554100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to MYST1 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 345.79 | 0.874 | 4.48 | -1.33 | 1.32 | 1.86 | 0.876 | -2.24 | -0.103 | 5.58 | 25.8 | 1266 | -- | -- |
| 347.33 | 0.868 | 4.41 | -0.758 | 1.29 | 1.62 | 0.865 | -- | 0.02 | 5.53 | 25.75 | 1258 | -- | -- |
| 347.64 | 0.868 | 4.47 | -1.29 | 1.32 | 1.85 | -- | -2.13 | -0.086 | 5.6 | 25.92 | 1265 | -- | -- |
| 348.95 | 0.87 | 4.41 | -0.75 | 1.32 | 1.63 | -- | -- | 0.0406 | 5.56 | 25.97 | 1264 | -- | -- |
| 436.52 | 0.973 | 4.51 | -1.24 | -- | 2.04 | -- | -1.69 | -0.165 | -- | 24.9 | 1281 | -- | -- |
| 452.54 | 0.997 | 4.38 | -0.234 | 1.46 | -- | 1.21 | -- | 0.15 | 4.92 | -- | -- | -- | -- |
| 456.27 | 1 | 4.38 | -0.237 | 1.47 | -- | -- | -- | 0.144 | 4.96 | -- | -- | -- | -- |
| 437.39 | 0.974 | 4.45 | -0.793 | -- | 1.87 | -- | -- | -0.0463 | -- | 24.93 | 1275 | -- | -- |
| 363.09 | 0.887 | 4.39 | -- | 1.33 | 1.5 | -- | -- | 0.149 | 5.44 | 26.3 | 1265 | -- | -- |
| 570.22 | 1.12 | 4.4 | -0.183 | -- | -- | -- | -- | 0.182 | -- | -- | -- | -- | -- |
| 457.75 | 1 | 4.38 | -- | 1.47 | -- | -- | -- | 0.17 | 4.96 | -- | -- | -- | -- |
| 452.62 | 0.991 | 4.42 | -- | -- | 1.67 | -- | -- | 0.0949 | -- | 25.38 | 1274 | -- | -- |
| 571.11 | 1.12 | 4.4 | -- | -- | -- | -- | -- | 0.202 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 339.98 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 3 | 344.75 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 29 | 350.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 30 | 350.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 31 | 350.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 19 |
| 40 | 350.96 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 58 | 351.40 | temperature | 25 | 1440 | > th | dose dependent | sin | 15 | NA |
| 166 | 353.47 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 19 |
| 170 | 353.49 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 20 |
| 208 | 353.77 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 246 | 354.10 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 361 | 356.61 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 391 | 357.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 20 |
| 397 | 357.92 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 20 |
| 427 | 358.22 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 15 |
| 432 | 358.29 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 434 | 358.30 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 449 | 358.31 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 454 | 358.37 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 11 |
| 469 | 358.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 474 | 358.43 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 9 |
| 485 | 358.57 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 508 | 359.11 | temperature | 30 | 1440 | > th | dose independent | sin | 13 | NA |
| 510 | 359.11 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 518 | 359.20 | temperature | 30 | 1440 | < th | dose independent | sin | 14 | NA |
| 606 | 360.10 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 608 | 360.12 | humidity | 70 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 614 | 360.18 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 638 | 360.32 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 652 | 360.40 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 654 | 360.40 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 655 | 360.40 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 664 | 360.43 | humidity | 70 | 4320 | > th | dose independent | rect. | 19 | 6 |
| 667 | 360.43 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 13 |
| 686 | 360.46 | temperature | 30 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 688 | 360.47 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 689 | 360.47 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 19 |
| 693 | 360.47 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 705 | 360.49 | humidity | 70 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 711 | 360.50 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 712 | 360.50 | humidity | 70 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 715 | 360.50 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 21 |
| 785 | 360.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 820 | 360.87 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 838 | 360.90 | humidity | 70 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 848 | 360.97 | temperature | 30 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 864 | 361.04 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |