Os08g0553600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF241, plant family protein.
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Os08g0553600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF241, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 320.03 | 0.841 | 3.24 | -0.104 | 0.231 | 0.854 | 1.16 | 2.09 | -0.109 | 13.8 | 46.75 | 4237 | -- | -- |
| 320.08 | 0.833 | 3.28 | -0.197 | 0.225 | 1.71 | 1.21 | -- | -0.117 | 14 | 46.58 | 4237 | -- | -- |
| 325.18 | 0.84 | 3.24 | -0.0589 | 0.235 | 0.815 | -- | 2.11 | -0.105 | 13.3 | 46.49 | 4257 | -- | -- |
| 325.02 | 0.84 | 3.27 | -0.148 | 0.219 | 1.63 | -- | -- | -0.102 | 13.2 | 46.32 | 4370 | -- | -- |
| 328.03 | 0.844 | 3.24 | -0.0649 | -- | 0.745 | -- | 2.17 | -0.107 | -- | 46.27 | 4386 | -- | -- |
| 357.91 | 0.887 | 3.28 | 0.276 | 0.217 | -- | 1 | -- | -0.147 | 14 | -- | -- | -- | -- |
| 361.71 | 0.891 | 3.28 | 0.306 | 0.218 | -- | -- | -- | -0.141 | 13.3 | -- | -- | -- | -- |
| 327.95 | 0.843 | 3.27 | -0.148 | -- | 1.62 | -- | -- | -0.107 | -- | 46.17 | 4380 | -- | -- |
| 325.49 | 0.84 | 3.27 | -- | 0.22 | 1.57 | -- | -- | -0.0927 | 13.2 | 46.05 | 4370 | -- | -- |
| 364.64 | 0.892 | 3.28 | 0.298 | -- | -- | -- | -- | -0.146 | -- | -- | -- | -- | -- |
| 364.18 | 0.893 | 3.29 | -- | 0.213 | -- | -- | -- | -0.175 | 13.3 | -- | -- | -- | -- |
| 328.47 | 0.844 | 3.27 | -- | -- | 1.56 | -- | -- | -0.0957 | -- | 45.99 | 4381 | -- | -- |
| 366.98 | 0.894 | 3.29 | -- | -- | -- | -- | -- | -0.179 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 319.49 | humidity | 50 | 4320 | < th | dose dependent | rect. | 16 | 22 |
| 5 | 320.50 | humidity | 50 | 4320 | < th | dose dependent | sin | 5 | NA |
| 8 | 320.53 | humidity | 50 | 4320 | < th | dose dependent | rect. | 11 | 4 |
| 27 | 320.57 | humidity | 50 | 4320 | < th | dose dependent | rect. | 12 | 2 |
| 49 | 320.73 | humidity | 50 | 4320 | < th | dose dependent | sin | 9 | NA |
| 78 | 321.40 | humidity | 50 | 4320 | < th | dose dependent | no | NA | NA |
| 271 | 321.70 | humidity | 50 | 4320 | > th | dose independent | rect. | 2 | 12 |
| 273 | 321.79 | humidity | 50 | 4320 | > th | dose independent | rect. | 6 | 8 |
| 274 | 321.80 | humidity | 50 | 4320 | > th | dose independent | sin | 5 | NA |
| 276 | 321.82 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 22 |
| 279 | 321.87 | humidity | 50 | 4320 | > th | dose independent | rect. | 22 | 16 |
| 283 | 321.90 | humidity | 50 | 4320 | > th | dose independent | rect. | 8 | 6 |
| 286 | 321.92 | humidity | 50 | 4320 | > th | dose independent | rect. | 18 | 20 |
| 321 | 322.34 | humidity | 50 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 322 | 322.34 | humidity | 50 | 4320 | < th | dose independent | rect. | 16 | 22 |
| 345 | 322.58 | humidity | 50 | 4320 | < th | dose independent | sin | 8 | NA |
| 362 | 322.69 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 1 |
| 364 | 322.73 | humidity | 50 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 388 | 322.90 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 4 |
| 390 | 322.96 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 3 |
| 474 | 323.65 | humidity | 50 | 4320 | > th | dose independent | rect. | 2 | 18 |
| 482 | 323.68 | humidity | 50 | 4320 | > th | dose independent | rect. | 2 | 21 |
| 492 | 323.70 | humidity | 50 | 4320 | > th | dose independent | rect. | 6 | 22 |
| 498 | 323.72 | humidity | 50 | 4320 | > th | dose independent | rect. | 6 | 17 |
| 506 | 323.73 | humidity | 50 | 4320 | > th | dose independent | rect. | 23 | 21 |
| 522 | 323.75 | humidity | 50 | 4320 | > th | dose independent | rect. | 8 | 20 |
| 541 | 323.76 | humidity | 50 | 4320 | > th | dose independent | rect. | 8 | 23 |
| 542 | 323.77 | humidity | 50 | 4320 | > th | dose independent | no | NA | NA |
| 588 | 323.84 | temperature | 25 | 270 | < th | dose independent | rect. | 13 | 1 |
| 650 | 324.76 | atmosphere | 1010 | 1440 | > th | dose dependent | rect. | 17 | 17 |
| 715 | 325.49 | humidity | 50 | 4320 | < th | dose independent | no | NA | NA |
| 892 | 325.63 | atmosphere | 1010 | 1440 | > th | dose dependent | sin | 10 | NA |