BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0553600 Os08g0553600|Os08g0553600
(242 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G17070.1 | chr2:7430863-7431654 REVERSE LENGTH=264 107 5e-24
AT2G17080.1 | chr2:7433326-7434117 REVERSE LENGTH=264 103 8e-23
AT4G35200.1 | chr4:16749142-16749903 REVERSE LENGTH=254 84 5e-17
AT4G35210.1 | chr4:16751428-16752180 FORWARD LENGTH=251 83 2e-16
AT1G76210.1 | chr1:28595202-28595882 REVERSE LENGTH=227 77 6e-15
AT4G35690.1 | chr4:16921886-16922740 FORWARD LENGTH=285 73 1e-13
AT2G17680.1 | chr2:7679241-7680119 FORWARD LENGTH=293 60 8e-10
AT4G35660.1 | chr4:16912792-16913658 FORWARD LENGTH=289 57 9e-09
AT4G35680.1 | chr4:16917938-16919749 FORWARD LENGTH=504 55 4e-08
AT1G20520.1 | chr1:7106922-7107617 REVERSE LENGTH=232 54 6e-08
AT4G35710.1 | chr4:16925301-16926152 FORWARD LENGTH=284 54 7e-08
AT4G35720.1 | chr4:16927972-16928949 FORWARD LENGTH=326 47 7e-06
>AT2G17070.1 | chr2:7430863-7431654 REVERSE LENGTH=264
Length = 263
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 138/264 (52%), Gaps = 31/264 (11%)
Query: 3 FHLRSASVPSSPCSNETNIEEQLASLREIICSPSATMETMCNGFRRLTDVYSCMDEIMCL 62
FH+RS S PS P +++EQLA LR + +++ ++C L +++ +D+++ L
Sbjct: 5 FHVRSHSYPSIPHPQAAHVDEQLARLRSSEETSTSSSSSICQRLDNLQELHESLDKLIRL 64
Query: 63 PSSQASLCKHQQRREVEKELERSLTLLDLCNAMQESFSELKATTQEMQ--LAIKRGEDAA 120
P +Q +L + + +++VE+ L+ SL +LD+CN +++ S++K E+Q L KRG+
Sbjct: 65 PVTQQALGQEKNKKDVEQLLDGSLKILDVCNISKDALSQMKEGLMEIQSILRRKRGD--- 121
Query: 121 VQTNVQSYTRLTKKAHKQCKKINKK-PASSADQESCRVVKLMADAREITFSVLESTLHLL 179
+ V+ Y K K +K+ K A+ A+ + + + +A +T ++ +S +
Sbjct: 122 LSGEVKKYLASRKSFKKTFQKVQKSLKAAQAEDNKDKSLAVFGEAEAVTIAMFDSLFSYM 181
Query: 180 SKQIAVPSSSKWSL--KAFQKTRVTCQE--------------------EQLQVLELDIVD 217
S + SKWS+ K K ++TC+ E +Q+LE I D
Sbjct: 182 S---GSKTCSKWSVVSKLMNKKKITCEAQENEFTKVDSEFQSEKTLKMEDVQILESCIQD 238
Query: 218 LQSGVETLFRRLIQSRVSLLNALS 241
+ G+E+L + LI+ RVS+LN+
Sbjct: 239 FEDGLESLSKSLIKYRVSILNSFG 262
>AT2G17080.1 | chr2:7433326-7434117 REVERSE LENGTH=264
Length = 263
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 134/264 (50%), Gaps = 31/264 (11%)
Query: 3 FHLRSASVPSSPCSNETNIEEQLASLREIICSPSATMETMCNGFRRLTDVYSCMDEIMCL 62
FH+RS S PS +++EQLA LR + S++ ++C L +++ +D+++
Sbjct: 5 FHVRSNSFPSRSHPQAAHVDEQLARLRSSEQASSSSSSSICQRLDNLQELHESLDKLISR 64
Query: 63 PSSQASLCKHQQRREVEKELERSLTLLDLCNAMQESFSELKATTQEMQ--LAIKRGEDAA 120
P +Q +L + ++ VE+ L+ SL +LDLCN +++ SE+K E+Q L KRG+
Sbjct: 65 PVTQQALSQEHNKKAVEQLLDGSLRILDLCNISKDALSEMKEGLMEIQSILRRKRGD--- 121
Query: 121 VQTNVQSYTRLTKKAHKQCKKINKK-PASSADQESCRVVKLMADAREITFSVLESTLHLL 179
+ V+ Y K K +K+ K + A+ + + + +A IT S+ +S L +
Sbjct: 122 LSEEVKKYLTSRKSLKKSFQKVQKSLKVTQAEDNNDDTLAVFGEAEAITLSLFDSLLSYM 181
Query: 180 SKQIAVPSSSKWSL--KAFQKTRVTCQEEQLQVLELD--------------------IVD 217
S + SKWS+ K K +VTC+ ++ + ++D I D
Sbjct: 182 S---GSKTCSKWSVVSKLMNKKKVTCEAQENEFTKVDSEFQSEKTLKMDDVQNLESCIQD 238
Query: 218 LQSGVETLFRRLIQSRVSLLNALS 241
L+ G+E+L + LI+ RVS LN L
Sbjct: 239 LEDGLESLSKSLIKYRVSFLNILG 262
>AT4G35200.1 | chr4:16749142-16749903 REVERSE LENGTH=254
Length = 253
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 127/260 (48%), Gaps = 36/260 (13%)
Query: 3 FHLRSASVPSSPCSNETNIEEQLASLREIICSPSATMETMCNGFRRLTDVYSCMDEIMCL 62
FH+RS S PS +++EQL LR S SA+ ++C L D++ +++++ L
Sbjct: 5 FHVRSNSYPSRQHPQAAHVDEQLTRLRS---SDSASSSSICQRLSNLQDLHDSLEKMIRL 61
Query: 63 PSSQASLCKHQQRREVEKELERSLTLLDLCNAMQESFSELKATTQEMQLAIKRGEDAAVQ 122
+ +L + Q +EK L+ SL +LDLCN +++ S++K E+Q +I R + +
Sbjct: 62 SVTNLALSQDQ----IEKLLDGSLRILDLCNIAKDAISQMKEGLMEIQ-SILRRKPGDLS 116
Query: 123 TNVQSYTRLTKKAHKQCKKINK--KPASSADQESCRVVKLMADAREITFSVLESTLHLLS 180
V+ Y K K +K+ K K S D + +V + A +T ++ ES +S
Sbjct: 117 GEVKKYLVSRKFLKKSLQKVIKSLKVCQSKDSTNASLV-VFGRAEAVTMALFESLFSFMS 175
Query: 181 KQIAVPSSSKWSL--KAFQKTRVTC--------------------QEEQLQVLELDIVDL 218
A KWSL K + +VTC Q E +Q LE I DL
Sbjct: 176 GSKAC---GKWSLVSKMMSQNKVTCEAEANEFTRIDSEFQSEKSLQMEDVQNLESCIQDL 232
Query: 219 QSGVETLFRRLIQSRVSLLN 238
+ G+E+L + LI+ RVS+LN
Sbjct: 233 EDGIESLSKSLIKYRVSILN 252
>AT4G35210.1 | chr4:16751428-16752180 FORWARD LENGTH=251
Length = 250
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 130/260 (50%), Gaps = 39/260 (15%)
Query: 3 FHLRSASVPSSPCSNETNIEEQLASLREIICSPSATMETMCNGFRRLTDVYSCMDEIMCL 62
FH+RS+S PS +++EQL LR S +A+ ++C L D++ +++++ L
Sbjct: 5 FHVRSSSYPSRQHPQAAHVDEQLTRLRS---SGTASSSSICQRLSNLQDLHDSLEKMIRL 61
Query: 63 PSSQASLCKHQQRREVEKELERSLTLLDLCNAMQESFSELKATTQEMQLAI--KRGEDAA 120
+ +L + Q +EK L+ S+ +LDLC+ ++ S++K + +E+Q + KRG+ +A
Sbjct: 62 SVTNQALSQDQ----IEKLLDGSIKILDLCSISKDGLSQMKESLKEIQSIVRRKRGDLSA 117
Query: 121 VQTNVQSYTRLTKKAHKQCKKINKKPASSADQESCRVVKLMADAREITFSVLESTLHLLS 180
V+ Y K K +K+ K +S ++ V +A +T ++ ES +S
Sbjct: 118 ---EVKKYLASRKFLKKSFEKVLKSLKTSQNKNDALAV--FGEAETVTIALFESLFSFMS 172
Query: 181 KQIAVPSSSKWSL--KAFQKTRVTC--------------------QEEQLQVLELDIVDL 218
+ KWSL K +++ TC Q E +Q LE+ I DL
Sbjct: 173 ---GSKACGKWSLVSKMMSQSKGTCEAEANEFTRVDMEFQSEKSLQMEDVQNLEICIQDL 229
Query: 219 QSGVETLFRRLIQSRVSLLN 238
+ G+ +L + LI+ RVS+LN
Sbjct: 230 EDGIGSLSKSLIKYRVSILN 249
>AT1G76210.1 | chr1:28595202-28595882 REVERSE LENGTH=227
Length = 226
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 26/222 (11%)
Query: 45 GFRRLTDVYSCMDEIM--CLPSSQASLCKHQQRREVEKELERSLTLLDLCNAMQESFSEL 102
F L +++ C++ ++ C P ++ SL + Q + E+ E SL +LD+CN ++ + +
Sbjct: 5 NFEGLRELHDCVNYLLHHC-PKTRESLSQQGQEKWTEQVSEASLRMLDICNVSKDVMTLV 63
Query: 103 KATTQEMQLAIKRGEDAAVQTNVQSYTRLTKKAHKQ------CKKINK----KPASSADQ 152
K + Q++QL ++ E + V + +Y R K K+ C K K + A +Q
Sbjct: 64 KHSLQDLQLTLRGNESSDVNEKIAAYNRYKNKLKKETLKCLNCLKNMKGNEGRVAMPIEQ 123
Query: 153 ESCRVVKLMADAREITFSVLESTLHLLSKQIAVPSSSKWSLKA-------------FQKT 199
V +++ + R + +++ES L SSK SL + + +T
Sbjct: 124 NLLFVTEVLKEVRRVVVTMVESLFSLGCIPWLEKRSSKGSLSSIFSIRSSYLLDDEWDET 183
Query: 200 RVTCQEEQLQVLELDIVDLQSGVETLFRRLIQSRVSLLNALS 241
V +L+ E+ +V+L+ +E++FRRLIQ+RVSLLN L+
Sbjct: 184 AVQSATTRLEAAEITVVELEIELESIFRRLIQTRVSLLNILT 225
>AT4G35690.1 | chr4:16921886-16922740 FORWARD LENGTH=285
Length = 284
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 41/276 (14%)
Query: 5 LRSASVPSSPCSNETNIEEQLASLREIICSPSATMETMCNGFRRLTDVYSCMDEIMCLPS 64
LRS S+PSS + T IEE L ++ I + + + E++ G L ++Y+C ++ + + S
Sbjct: 10 LRSISLPSSSHPSTTGIEESLNKVK-TINTMTGSSESVLMGLEGLEELYNCTEDFLKMGS 68
Query: 65 SQASLCKHQQRREVEKELERSLTLLDLCNAMQESFSELKATTQEMQLAIKR-----GEDA 119
+Q + +E+ L+ SL L+D+C+ ++ E + + +Q ++R GED
Sbjct: 69 TQRVMSSSDGSEFMEEMLDGSLRLMDICSVSRDLMVETQEHVRGVQSCVRRKKVVGGED- 127
Query: 120 AVQTNVQSYTRLTKKAHKQCKKI------------NKKPASSADQES--CRVVKLMADAR 165
+ V Y K K+ K++ + ++ +QE VV M
Sbjct: 128 QLDVAVAGYVGFRKNMRKEAKRLLGSLKNIDGGLSSSSSVNNGEQEEHLVVVVDAMRQVV 187
Query: 166 EITFSVLESTLHLLS--KQIAVPSSSKWSLKAFQKTRVTCQEEQLQVLELDIV----DLQ 219
++ +VL S L LS +Q + S LK + V + +L+ L+L+I DLQ
Sbjct: 188 SVSVAVLRSFLEFLSGRRQSNIKSKLASVLKKKKVHHVEETKNELENLDLEIFCSRNDLQ 247
Query: 220 --------------SGVETLFRRLIQSRVSLLNALS 241
+E LFRRLI++R SLLN +S
Sbjct: 248 KKLEEVEMSIDGFEKKLEGLFRRLIRTRASLLNIIS 283
>AT2G17680.1 | chr2:7679241-7680119 FORWARD LENGTH=293
Length = 292
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 57/289 (19%)
Query: 4 HLRSASVPSSPCSNETNIEEQLASLREIICSPSATM---ETMCNGFRRLTDVYSCMDEIM 60
H+RS S+ S + IEE L +I ++TM E++ +G L D+Y C ++++
Sbjct: 9 HVRSISLQSRSHPSTAAIEESLDKF--LITMNTSTMASSESVHSGLSGLEDLYDCSEDLL 66
Query: 61 CLPSSQASLCKHQQRRE---------VEKELERSLTLLDLCNAMQESFSELKATTQEMQL 111
+ S+Q L ++++ +E+ L+ SL L+D+CN ++ E +Q
Sbjct: 67 KMGSTQRVLSFSDEKKKKKRKVKGEFMEEMLDGSLRLMDICNVSRDLMVETHEHVLGLQS 126
Query: 112 AIKRGEDAAVQTNVQSYTRLTKKAHKQCKKI--------------NKKPASSADQESCRV 157
++R +D +V Y K K+ KK+ + D V
Sbjct: 127 CVRRRKD----VDVSGYVGFRKNMRKEVKKLLGSLKNINVGLVMRDHGYDQDGDIHFLAV 182
Query: 158 VKLMADAREITFSVLESTLHLLS-KQIAVPSSSKWSL----KAFQK------------TR 200
+ M +T SVL+S LS +Q SK +L K F
Sbjct: 183 IHAMRRVVYMTVSVLKSFFEFLSGRQNGNDVRSKLALVLMNKKFHDHDKMVKNELENVDS 242
Query: 201 VTCQE--------EQLQVLELDIVDLQSGVETLFRRLIQSRVSLLNALS 241
C + E+L+ +E+ I + +E LFR LI++R SLLN +S
Sbjct: 243 AICGDSISHDDLHEKLEEVEVWIGKFEKSLEGLFRGLIKTRASLLNIIS 291
>AT4G35660.1 | chr4:16912792-16913658 FORWARD LENGTH=289
Length = 288
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 35/233 (15%)
Query: 45 GFRRLTDVYSCMDE-IMCLPSSQASLCKHQQRREVEKELERSLTLLDLCNAMQESFSELK 103
G +L ++Y ++E ++ P Q +L + R+ VE L+ S+ LLD+ + ++ L
Sbjct: 56 GLAKLVELYDFVNEQVISSPQGQQALRLCRNRKLVEDALDESIVLLDVSDFTRDLIGTLM 115
Query: 104 ATTQEMQLAI--KRGEDAAVQTNVQSYTRLTKK----AHKQCKKINK----------KPA 147
QE+Q A+ +RG ++VQ+ ++SY KK A +Q K + + K +
Sbjct: 116 EHIQELQSALRRRRGNLSSVQSEIRSYISFHKKSKTEAARQVKSLARRQTKKKAWVIKQS 175
Query: 148 SSADQESCRVVKLMADAREITFSVLESTLHLLS----------KQIA-VPSSSKWSLKAF 196
D+ S V ++ + T S+L+S L LS +I V +S S
Sbjct: 176 GGLDEHSSMVSNILRQSNASTISILQSLLQFLSTSGENNEKKNGEIGCVDNSMIRSFFGR 235
Query: 197 QKTRVTCQE-------EQLQVLELDIVDLQSGVETLFRRLIQSRVSLLNALSL 242
R +E +L ++ + + ++ + L RRLIQ R SLLN ++L
Sbjct: 236 IIGRKMVKEIDAQTILGRLAMVNVSLEAIKDELSYLSRRLIQHRASLLNIVTL 288
>AT4G35680.1 | chr4:16917938-16919749 FORWARD LENGTH=504
Length = 503
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 119/253 (47%), Gaps = 52/253 (20%)
Query: 40 ETMCNGFRRLTDVYSCMDEIMCLPSSQASLCKHQQRREVEKELERSLTLLDLCNAMQESF 99
ET+ G LT++Y C+ E++ P + +L HQ+ + +++ L+ S+ LLD+ +E
Sbjct: 60 ETVLVGLVNLTELYGCVHELLESPYVKHTLLHHQEGKLLDESLDGSVLLLDVYEGTREVI 119
Query: 100 SELKATTQEMQLAIKRGEDAAVQTNVQSYTRLTKKAHKQC-KKIN-------KKPASSAD 151
++ ++ A++R +++ ++Y L KKA K+ K+IN + +++ D
Sbjct: 120 VAMREHVTNLKSALRR--KGSLEKEAKAYFNLRKKAKKEISKQINALKKMETRDISTNTD 177
Query: 152 QESCRV-VKLMADAREITFS-------------------VLESTLHLLSKQIAVPSSSKW 191
Q+S ++ + +IT S + ++T+ LLS PS S
Sbjct: 178 QDSAIASTSVLRETIQITVSMFRHLLLFLSTIPPPPSPAIFKTTIGLLSIPFVSPSLSDK 237
Query: 192 SLKAFQKTRV--------------------TCQEEQLQ--VLELDIVDLQSGVETLFRRL 229
SL ++ + T + E+++ V+E DL++ ++++ + L
Sbjct: 238 SLILIKEMKSLDDVFLGSILDSRKTLFEVETMENEKMRRDVVEDGFRDLEAELDSVSKCL 297
Query: 230 IQSRVSLLNALSL 242
+++RV LN L+L
Sbjct: 298 VKNRVLFLNILNL 310
>AT1G20520.1 | chr1:7106922-7107617 REVERSE LENGTH=232
Length = 231
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 110/223 (49%), Gaps = 31/223 (13%)
Query: 45 GFRRLTDVYSCMDEIM--CLPSSQASLCKHQQRREVEKELERSLTLLDLCNAMQESFSEL 102
G R L D C + ++ C P ++ SLC+ + +E+ E SL +LD+CN ++ + +
Sbjct: 8 GLRELQD---CANYLLDHC-PEARESLCQQGKENWIEQVSEASLIMLDVCNVSKDVMALV 63
Query: 103 KATTQEMQLAIKRGEDAAVQTNVQSYTRLTKKAHKQCKKINKKPAS------------SA 150
+ Q++QL + R + + V +Y R K K+ K S S
Sbjct: 64 RHGLQDLQLTL-RCNGSNLSEKVAAYNRYRNKLKKETLKCLNSLKSIEGGGRGMMEMQSI 122
Query: 151 DQESCRVVKLMADAREITFSVLESTLHL-----LSKQIAVPS-SSKWSLK------AFQK 198
+Q V +++ + R +++ES L L ++ ++ S SS ++++ A+ +
Sbjct: 123 EQNLLFVAEVLKEVRRAVVTMVESLFSLVCVPWLERKPSIGSFSSIFTMQFCCFDDAWDE 182
Query: 199 TRVTCQEEQLQVLELDIVDLQSGVETLFRRLIQSRVSLLNALS 241
+ +L+ E+ + +L+ +E +FRRLIQ+RVSLLN L+
Sbjct: 183 VAMRSASTRLEAAEITVEELEIELECIFRRLIQTRVSLLNILT 225
>AT4G35710.1 | chr4:16925301-16926152 FORWARD LENGTH=284
Length = 283
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 40/275 (14%)
Query: 5 LRSASVPSSPCSNETNIEEQLASLREIICSPSATMETMCNGFRRLTDVYSCMDEIMCLPS 64
LRS S+PS + + +EE L ++ I + + + E++ G L ++Y ++E + + S
Sbjct: 10 LRSISLPSRSQPSTSGLEESLNKIK-TINTTTGSSESILMGLAGLEELYIFLEEFLKMGS 68
Query: 65 SQASLCKHQQRREVEKELERSLTLLDLCNAMQESFSELKATTQEMQLAIKR------GED 118
Q + +E+ L+ SL L+D+C+ ++ E + +Q ++R G
Sbjct: 69 KQRVMSSGGSEF-MEEMLDGSLRLMDICSVSRDLMVETHEHVRGVQSYVRRKKVSGGGGG 127
Query: 119 AAVQTNVQSYTRLTKKAHKQCKKI--NKKPASSA---------DQESCRVVKLMADAREI 167
+ V Y K K+ KK+ + K D++ V+ + +
Sbjct: 128 DKIDVAVSDYVGFRKNMRKEAKKLLGSLKKVDGGTRSCDNDHEDEQLVAVIDRVRRVVSV 187
Query: 168 TFSVLESTLHLLSKQIAVPSSSKWSLKAFQKTRVTCQEEQLQVLELDIV-------DLQS 220
+ VL+S L LLS++ + S S+ +K + L+ L+ I DLQ+
Sbjct: 188 SVVVLKSFLELLSRRKSNIKSKLASVLKMKKDNHAPAKNVLETLDSAIFGDFLSHDDLQN 247
Query: 221 --------------GVETLFRRLIQSRVSLLNALS 241
+E LFRRLI++R S+LN +S
Sbjct: 248 ELEEVEMCIGGFERNLEGLFRRLIRTRASILNIIS 282
>AT4G35720.1 | chr4:16927972-16928949 FORWARD LENGTH=326
Length = 325
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 3 FHLRSASVPSSPCSNETNIEEQLASLREIICSPSATMETMCNGFRRLTDVYSCMDEIMCL 62
+ R S+P + I+E ++ +R + S + + + LT++Y C+ E +
Sbjct: 14 YKARCVSLPVRSHPSVRRIQEVVSKVRALGSSSLDSRTIVRDSLSGLTELYRCLSEDLFK 73
Query: 63 PSSQASLCKHQQRREVEKELERSLTLLDLCNAMQESFSELKATTQEMQLAIKR---GEDA 119
SS+ +E+ LE SL L++C +++ S +K E+Q A++R G +
Sbjct: 74 SSSETQQALLNGDGLMEELLEVSLKYLEVCGGAKDAASRIKKIVVELQSALRRSKKGGEF 133
Query: 120 AVQTNVQSYTRLTKKAHKQCKK---INKKPASS--------ADQESCRVVKLMADAREIT 168
+++++V +Y K+ ++ KK ++K+ +S DQE +V++M + +T
Sbjct: 134 SLESDVDAYVASRKEIKQEIKKYMVMSKETDASLESVWCDGDDQEMSALVRVMQETSVMT 193
Query: 169 FSVLESTLHLLS 180
VL S LS
Sbjct: 194 CFVLRSVFSFLS 205
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.125 0.343
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,562,496
Number of extensions: 168507
Number of successful extensions: 714
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 704
Number of HSP's successfully gapped: 12
Length of query: 242
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 146
Effective length of database: 8,474,633
Effective search space: 1237296418
Effective search space used: 1237296418
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 110 (47.0 bits)