Os08g0553500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF241, plant family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0553500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF241, plant family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.98 | 0.348 | 1640 | -10000 | 0.0786 | 412000 | 0.452 | -2520000 | -0.0466 | 8.09 | 995 | 90 | -- | -- |
| 60.17 | 0.364 | 2.96 | 0.0132 | 0.0583 | 0.934 | 0.411 | -- | -0.0509 | 8.64 | 995 | 90 | -- | -- |
| 56.49 | 0.35 | 1640 | -10000 | 0.0911 | 412000 | -- | -2520000 | -0.048 | 6.33 | 995 | 90 | -- | -- |
| 53.41 | 0.34 | 2.95 | 0.00482 | 0.0702 | 2.87 | -- | -- | -0.0446 | 6.57 | 994.6 | 213 | -- | -- |
| 56.92 | 0.351 | 1640 | -10000 | -- | 412000 | -- | -2520000 | -0.0462 | -- | 995 | 90 | -- | -- |
| 61.13 | 0.367 | 2.96 | 0.0195 | 0.0485 | -- | 0.392 | -- | -0.0537 | 9.11 | -- | -- | -- | -- |
| 61.59 | 0.368 | 2.96 | 0.0318 | 0.0615 | -- | -- | -- | -0.0543 | 6.79 | -- | -- | -- | -- |
| 53.81 | 0.342 | 2.96 | 0.0184 | -- | 2.83 | -- | -- | -0.0467 | -- | 994.6 | 210 | -- | -- |
| 53.42 | 0.34 | 2.95 | -- | 0.0709 | 2.87 | -- | -- | -0.0442 | 6.6 | 994.5 | 224 | -- | -- |
| 61.79 | 0.367 | 2.96 | 0.0332 | -- | -- | -- | -- | -0.0531 | -- | -- | -- | -- | -- |
| 61.62 | 0.367 | 2.96 | -- | 0.0619 | -- | -- | -- | -0.0578 | 6.76 | -- | -- | -- | -- |
| 53.81 | 0.342 | 2.96 | -- | -- | 2.83 | -- | -- | -0.0488 | -- | 994.6 | 212 | -- | -- |
| 61.82 | 0.367 | 2.96 | -- | -- | -- | -- | -- | -0.0568 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.69 | atmosphere | 995.0 | 30 | > th | dose independent | sin | 8 | NA |
| 6 | 52.82 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 17 | 1 |
| 13 | 52.82 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 17 | 1 |
| 20 | 52.86 | humidity | 70.0 | 30 | < th | dose independent | rect. | 18 | 1 |
| 21 | 52.87 | temperature | 30.0 | 30 | > th | dose independent | rect. | 18 | 1 |
| 71 | 52.93 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 125 | 53.27 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 148 | 53.37 | atmosphere | 995.0 | 30 | < th | dose independent | sin | 8 | NA |
| 169 | 53.37 | atmosphere | 995.0 | 30 | < th | dose dependent | sin | 8 | NA |
| 475 | 53.48 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 540 | 53.68 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 5 | 1 |
| 541 | 53.68 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 5 | 1 |
| 544 | 53.77 | radiation | 10.0 | 90 | > th | dose independent | rect. | 17 | 1 |
| 720 | 55.27 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 18 | 1 |
| 741 | 55.55 | temperature | 30.0 | 10 | > th | dose independent | sin | 12 | NA |
| 802 | 55.98 | atmosphere | 995.0 | 270 | > th | dose independent | sin | 4 | NA |
| 842 | 56.48 | atmosphere | 995.0 | 90 | < th | dose dependent | no | NA | NA |