Os08g0548200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ER lumen protein retaining receptor-like protein.
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Os08g0548200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ER lumen protein retaining receptor-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.89 | 0.21 | 12.4 | 0.456 | 0.39 | 0.132 | 0.19 | -2.83 | 0.335 | 21.9 | 24.98 | 5371 | -- | -- |
| 21.81 | 0.217 | 12.3 | 1.22 | 0.379 | -0.215 | 0.0431 | -- | 0.593 | 21.6 | 27.48 | 13401 | -- | -- |
| 20.01 | 0.208 | 12.4 | 0.453 | 0.389 | 0.132 | -- | -2.8 | 0.336 | 21.8 | 25.06 | 5406 | -- | -- |
| 21.56 | 0.216 | 12.3 | 1.3 | 0.383 | -0.204 | -- | -- | 0.619 | 21.6 | 29.07 | 14646 | -- | -- |
| 28.46 | 0.248 | 12.5 | 0.421 | -- | -0.000517 | -- | -2.36 | 0.253 | -- | 19.32 | 10311 | -- | -- |
| 23.24 | 0.226 | 12.4 | 1.16 | 0.387 | -- | 0.113 | -- | 0.501 | 21.7 | -- | -- | -- | -- |
| 23.29 | 0.226 | 12.4 | 1.15 | 0.387 | -- | -- | -- | 0.501 | 21.7 | -- | -- | -- | -- |
| 29.82 | 0.254 | 12.3 | 1.26 | -- | -0.277 | -- | -- | 0.631 | -- | 32.4 | 13260 | -- | -- |
| 32.84 | 0.267 | 12.4 | -- | 0.376 | 0.812 | -- | -- | 0.13 | 21.6 | 6.225 | 47520 | -- | -- |
| 32.15 | 0.265 | 12.3 | 1.16 | -- | -- | -- | -- | 0.5 | -- | -- | -- | -- | -- |
| 58.27 | 0.357 | 12.4 | -- | 0.39 | -- | -- | -- | 0.373 | 21.9 | -- | -- | -- | -- |
| 41.19 | 0.299 | 12.4 | -- | -- | 0.822 | -- | -- | 0.126 | -- | 3.458 | 47520 | -- | -- |
| 67.36 | 0.383 | 12.4 | -- | -- | -- | -- | -- | 0.372 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.45 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 6 | 17.56 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 16 | 17.75 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 44 | 17.82 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 140 | 17.94 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 189 | 17.99 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 240 | 18.08 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 253 | 18.10 | wind | 9.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 274 | 18.12 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 276 | 18.12 | wind | 1.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 288 | 18.13 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 293 | 18.14 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 294 | 18.14 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 310 | 18.16 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 8 |
| 314 | 18.17 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 315 | 18.17 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 324 | 18.18 | wind | 5.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 348 | 18.20 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 478 | 18.32 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 493 | 18.33 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 534 | 18.36 | wind | 7.0 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 547 | 18.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 8 |
| 588 | 18.39 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 595 | 18.39 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 8 |
| 609 | 18.40 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 621 | 18.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 637 | 18.42 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 645 | 18.42 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 10 |
| 653 | 18.43 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 679 | 18.44 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 687 | 18.44 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 820 | 18.49 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 932 | 18.51 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 6 |