Os08g0545600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os08g0545600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.93 | 0.304 | 2.93 | -0.186 | 0.175 | 4.94 | -0.536 | -17 | 0.0124 | 4.76 | 0.08891 | 9 | -- | -- |
| 46.62 | 0.32 | 2.92 | -0.166 | 0.215 | -0.326 | -0.665 | -- | -0.00388 | 4.55 | 0.502 | 4 | -- | -- |
| 42.38 | 0.303 | 2.93 | -0.179 | 0.17 | 4.74 | -- | -16.6 | 0.0163 | 4.38 | 0.1353 | 7 | -- | -- |
| 47.79 | 0.324 | 2.91 | -0.16 | 0.211 | -0.419 | -- | -- | -0.000576 | 4.48 | 0.502 | 4 | -- | -- |
| 43.41 | 0.307 | 2.93 | -0.16 | -- | 3.99 | -- | -14.3 | 0.0233 | -- | 0.009462 | 5 | -- | -- |
| 46.72 | 0.32 | 2.92 | -0.169 | 0.212 | -- | -0.682 | -- | -0.00334 | 4.56 | -- | -- | -- | -- |
| 47.97 | 0.324 | 2.91 | -0.165 | 0.207 | -- | -- | -- | 0.000235 | 4.48 | -- | -- | -- | -- |
| 50.17 | 0.331 | 2.91 | -0.153 | -- | -0.318 | -- | -- | 0.00517 | -- | 0.5782 | 6 | -- | -- |
| 48.47 | 0.326 | 2.91 | -- | 0.208 | -0.46 | -- | -- | 0.0172 | 4.49 | 0.502 | 4 | -- | -- |
| 50.27 | 0.331 | 2.91 | -0.156 | -- | -- | -- | -- | 0.00571 | -- | -- | -- | -- | -- |
| 48.68 | 0.326 | 2.91 | -- | 0.204 | -- | -- | -- | 0.0186 | 4.5 | -- | -- | -- | -- |
| 50.79 | 0.333 | 2.91 | -- | -- | -0.358 | -- | -- | 0.0221 | -- | 0.7118 | 9 | -- | -- |
| 50.91 | 0.333 | 2.91 | -- | -- | -- | -- | -- | 0.0231 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.08 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 2 |
| 4 | 38.66 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 3 |
| 8 | 38.67 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 3 |
| 31 | 39.54 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 15 | 12 |
| 39 | 39.63 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 4 |
| 79 | 40.30 | humidity | 90.0 | 270 | > th | dose independent | rect. | 24 | 1 |
| 81 | 40.42 | humidity | 90.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 83 | 40.45 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 24 | 4 |
| 85 | 40.48 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 23 | 5 |
| 86 | 40.50 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 89 | 40.58 | humidity | 90.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 114 | 40.86 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 141 | 40.88 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 7 |
| 244 | 41.00 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 248 | 41.00 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 285 | 41.04 | precipitation | 0.1 | 10 | < th | dose independent | sin | 8 | NA |
| 286 | 41.04 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 8 | NA |
| 287 | 41.04 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 8 | NA |
| 293 | 41.05 | precipitation | 0.1 | 10 | > th | dose independent | sin | 8 | NA |
| 339 | 41.21 | wind | 1.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 372 | 41.45 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 373 | 41.46 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 399 | 41.46 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 463 | 41.65 | wind | 1.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 717 | 42.33 | precipitation | 0.1 | 10 | > th | dose independent | no | NA | NA |
| 718 | 42.33 | precipitation | 0.1 | 10 | < th | dose independent | no | NA | NA |
| 776 | 42.33 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 23 |
| 791 | 42.33 | precipitation | 0.1 | 10 | < th | dose dependent | no | NA | NA |
| 793 | 42.34 | precipitation | 0.1 | 10 | > th | dose dependent | no | NA | NA |
| 850 | 42.34 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 907 | 42.54 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 913 | 42.55 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 5 |
| 928 | 42.65 | humidity | 90.0 | 270 | > th | dose independent | sin | 13 | NA |
| 968 | 42.77 | wind | 3.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 985 | 42.81 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 1 |