Os08g0535600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, Tim10/DDP-type family protein.
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Os08g0535600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, Tim10/DDP-type family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.81 | 0.401 | 9.03 | 0.0853 | 1.26 | 0.0427 | 0.48 | -4.11 | -0.196 | 18.3 | 32.1 | 1150 | -- | -- |
| 73.27 | 0.399 | 8.96 | 0.701 | 1.26 | -0.421 | 0.466 | -- | -0.183 | 18.3 | 33.1 | 1098 | -- | -- |
| 73.37 | 0.399 | 9.03 | 0.0673 | 1.26 | 0.0484 | -- | -4.17 | -0.195 | 18.3 | 31.94 | 1159 | -- | -- |
| 73.87 | 0.4 | 8.96 | 0.703 | 1.27 | -0.429 | -- | -- | -0.189 | 18.3 | 33.02 | 1116 | -- | -- |
| 155.34 | 0.58 | 9.02 | 0.0187 | -- | 0.0018 | -- | -4.43 | -0.212 | -- | 31.92 | 1203 | -- | -- |
| 81.84 | 0.424 | 8.94 | 0.616 | 1.28 | -- | 0.565 | -- | -0.121 | 18.1 | -- | -- | -- | -- |
| 82.61 | 0.426 | 8.94 | 0.61 | 1.28 | -- | -- | -- | -0.119 | 18.1 | -- | -- | -- | -- |
| 156.82 | 0.583 | 8.94 | 0.677 | -- | -0.471 | -- | -- | -0.229 | -- | 32.94 | 1193 | -- | -- |
| 86.67 | 0.434 | 8.98 | -- | 1.25 | -0.372 | -- | -- | -0.266 | 18.3 | 33.2 | 1132 | -- | -- |
| 168 | 0.606 | 8.92 | 0.573 | -- | -- | -- | -- | -0.148 | -- | -- | -- | -- | -- |
| 92.41 | 0.45 | 8.96 | -- | 1.27 | -- | -- | -- | -0.187 | 18.2 | -- | -- | -- | -- |
| 168.8 | 0.605 | 8.95 | -- | -- | -0.401 | -- | -- | -0.286 | -- | 33.4 | 1175 | -- | -- |
| 176.68 | 0.62 | 8.93 | -- | -- | -- | -- | -- | -0.211 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.88 | wind | 5.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 6 | 69.34 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 8 | 69.52 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 9 | 69.55 | wind | 7.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 12 | 69.79 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 13 | 69.79 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 15 | 69.85 | wind | 7.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 16 | 69.88 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 20 | 70.08 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 21 | 70.18 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 22 | 70.19 | wind | 5.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 25 | 70.22 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 29 | 70.24 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 30 | 70.28 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 5 |
| 31 | 70.28 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 37 | 70.42 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 4 |
| 38 | 70.42 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 43 | 70.51 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 47 | 70.54 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 8 |
| 48 | 70.54 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 20 |
| 50 | 70.55 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 54 | 70.59 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 56 | 70.59 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 57 | 70.59 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 59 | 70.59 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 60 | 70.59 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 61 | 70.59 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 62 | 70.59 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 20 |
| 67 | 70.64 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 69 | 70.66 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 71 | 70.70 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 82 | 70.73 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 87 | 70.77 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 88 | 70.77 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 19 |
| 90 | 70.77 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 92 | 70.78 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 94 | 70.78 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 95 | 70.78 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 98 | 70.78 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 99 | 70.78 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 101 | 70.78 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 105 | 70.78 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 107 | 70.78 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 108 | 70.78 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 110 | 70.78 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 111 | 70.78 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 112 | 70.78 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 113 | 70.78 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 115 | 70.80 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 120 | 70.85 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 129 | 70.92 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 135 | 70.95 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 142 | 70.99 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 20 |
| 145 | 71.02 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 148 | 71.07 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 153 | 71.10 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 158 | 71.12 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 172 | 71.19 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 20 |
| 174 | 71.19 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 20 |
| 175 | 71.21 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 194 | 71.28 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 10 |
| 206 | 71.31 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 255 | 71.49 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 264 | 71.51 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 20 | 8 |
| 275 | 71.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 278 | 71.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 284 | 71.62 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 286 | 71.62 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 319 | 71.75 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 16 |
| 324 | 71.75 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 325 | 71.76 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 8 |
| 328 | 71.77 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 333 | 71.80 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 8 |
| 334 | 71.80 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 8 |
| 335 | 71.80 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 8 |
| 339 | 71.80 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 8 |
| 344 | 71.80 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 16 |
| 346 | 71.80 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 348 | 71.80 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 8 |
| 354 | 71.82 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 355 | 71.83 | wind | 3.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 356 | 71.83 | humidity | 90.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 363 | 71.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 366 | 71.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 367 | 71.86 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 372 | 71.88 | humidity | 50.0 | 10 | > th | dose independent | rect. | 9 | 19 |
| 373 | 71.89 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 406 | 71.96 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 407 | 71.96 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 426 | 71.96 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 4 | 5 |
| 449 | 72.01 | wind | 9.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 468 | 72.05 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 470 | 72.05 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 474 | 72.07 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 476 | 72.08 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 483 | 72.11 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 494 | 72.13 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 495 | 72.13 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 496 | 72.13 | wind | 9.0 | 10 | < th | dose dependent | rect. | 20 | 8 |
| 497 | 72.13 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 498 | 72.13 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 515 | 72.18 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 20 |
| 539 | 72.19 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 547 | 72.21 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 552 | 72.22 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 558 | 72.24 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 560 | 72.25 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 562 | 72.25 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 575 | 72.28 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 576 | 72.28 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 577 | 72.28 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 578 | 72.28 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 582 | 72.28 | wind | 9.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 602 | 72.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 613 | 72.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 637 | 72.38 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 641 | 72.39 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 685 | 72.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 698 | 72.48 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 721 | 72.51 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 8 |
| 726 | 72.51 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 8 |
| 778 | 72.58 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 8 |
| 782 | 72.59 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 783 | 72.59 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 16 |
| 839 | 72.65 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 860 | 72.68 | humidity | 80.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 933 | 72.75 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 941 | 72.75 | wind | 9.0 | 10 | < th | dose dependent | rect. | 9 | 19 |
| 943 | 72.76 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 2 |
| 982 | 72.78 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 989 | 72.79 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 11 | 15 |