Os08g0532800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein.
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Os08g0532800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.96 | 0.361 | 11.4 | -1.54 | 0.861 | 1.02 | -0.766 | -2.44 | -0.0997 | 11.8 | 26 | 4639 | -- | -- |
| 61.43 | 0.365 | 11.4 | -0.975 | 0.823 | 0.657 | -0.795 | -- | -0.0649 | 11.9 | 26.17 | 6089 | -- | -- |
| 61.43 | 0.365 | 11.4 | -1.57 | 0.865 | 1.02 | -- | -2.48 | -0.0843 | 11.7 | 26.3 | 4655 | -- | -- |
| 63.1 | 0.37 | 11.3 | -0.975 | 0.892 | 0.742 | -- | -- | 0.0107 | 11.7 | 26.32 | 4678 | -- | -- |
| 95.96 | 0.459 | 11.4 | -1.22 | -- | 1.41 | -- | -3.5 | -0.0884 | -- | 26.3 | 4655 | -- | -- |
| 79.73 | 0.419 | 11.3 | -0.704 | 0.833 | -- | -0.847 | -- | 0.0246 | 11.9 | -- | -- | -- | -- |
| 82.82 | 0.426 | 11.3 | -0.739 | 0.836 | -- | -- | -- | 0.0204 | 11.9 | -- | -- | -- | -- |
| 99.66 | 0.467 | 11.4 | -0.904 | -- | 1.14 | -- | -- | -0.0159 | -- | 26.3 | 4655 | -- | -- |
| 85.87 | 0.432 | 11.3 | -- | 0.883 | 0.533 | -- | -- | 0.172 | 11.9 | 28.25 | 4714 | -- | -- |
| 126.86 | 0.526 | 11.4 | -0.764 | -- | -- | -- | -- | 0.00944 | -- | -- | -- | -- | -- |
| 97.21 | 0.461 | 11.3 | -- | 0.846 | -- | -- | -- | 0.103 | 11.9 | -- | -- | -- | -- |
| 120.8 | 0.514 | 11.3 | -- | -- | 1 | -- | -- | 0.0856 | -- | 26.3 | 4655 | -- | -- |
| 142.25 | 0.557 | 11.3 | -- | -- | -- | -- | -- | 0.0942 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.63 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 4 |
| 3 | 56.73 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 13 |
| 4 | 56.85 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 6 | 57.07 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 7 | 57.16 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 19 |
| 8 | 57.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 19 |
| 10 | 57.38 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 12 |
| 11 | 57.38 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 21 |
| 14 | 57.46 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 23 | 57.71 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 12 |
| 25 | 57.75 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 1 |
| 28 | 57.78 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 7 |
| 48 | 57.95 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 57 | 58.00 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 20 |
| 59 | 58.01 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 62 | 58.01 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 21 |
| 68 | 58.03 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 8 |
| 75 | 58.05 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 14 |
| 95 | 58.16 | temperature | 25 | 4320 | > th | dose dependent | sin | 4 | NA |
| 144 | 58.43 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 177 | 58.53 | radiation | 20 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 178 | 58.54 | radiation | 30 | 4320 | < th | dose dependent | rect. | 18 | 4 |
| 232 | 58.78 | temperature | 30 | 720 | < th | dose independent | rect. | 23 | 12 |
| 251 | 58.82 | radiation | 1 | 4320 | > th | dose dependent | rect. | 18 | 12 |
| 264 | 58.86 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 279 | 58.90 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 22 |
| 333 | 59.04 | temperature | 20 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 411 | 59.23 | radiation | 20 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 421 | 59.26 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 18 |
| 430 | 59.30 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 19 |
| 434 | 59.30 | radiation | 20 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 452 | 59.34 | temperature | 30 | 270 | < th | dose independent | rect. | 14 | 23 |
| 471 | 59.37 | radiation | 1 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 517 | 59.41 | temperature | 10 | 4320 | > th | dose dependent | rect. | 8 | 8 |
| 530 | 59.43 | radiation | 20 | 4320 | < th | dose independent | rect. | 3 | 5 |
| 548 | 59.45 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 569 | 59.47 | temperature | 10 | 4320 | > th | dose dependent | rect. | 12 | 4 |
| 587 | 59.48 | radiation | 30 | 4320 | > th | dose dependent | rect. | 15 | 18 |
| 600 | 59.50 | temperature | 10 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 633 | 59.53 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 668 | 59.57 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 4 |
| 697 | 59.59 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 13 |
| 698 | 59.60 | radiation | 1 | 4320 | < th | dose independent | sin | 12 | NA |
| 726 | 59.62 | temperature | 20 | 270 | > th | dose dependent | rect. | 2 | 16 |
| 728 | 59.62 | temperature | 25 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 733 | 59.64 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 742 | 59.64 | temperature | 25 | 4320 | > th | dose dependent | rect. | 11 | 23 |
| 766 | 59.67 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 791 | 59.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 12 |
| 837 | 59.76 | radiation | 1 | 4320 | > th | dose independent | sin | 12 | NA |
| 882 | 59.80 | radiation | 40 | 4320 | < th | dose dependent | rect. | 17 | 15 |
| 885 | 59.81 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 960 | 59.86 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 1 |