Os08g0531300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sua5/YciO/YrdC/YwlC domain containing protein.
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Os08g0531300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sua5/YciO/YrdC/YwlC domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.59 | 0.437 | 11.7 | 1.05 | 1.27 | -2.07 | 0.137 | 7.86 | -0.408 | 20.7 | 26.35 | 4462 | -- | -- |
| 92.57 | 0.448 | 11.9 | 1.02 | 1.32 | -2.51 | -0.632 | -- | -0.271 | 20.1 | 19.5 | 27945 | -- | -- |
| 85.65 | 0.431 | 11.7 | 1.11 | 1.28 | -2.1 | -- | 8.18 | -0.455 | 20.7 | 26.5 | 4449 | -- | -- |
| 87.62 | 0.436 | 11.8 | 1.24 | 1.27 | -2.74 | -- | -- | -0.243 | 20.7 | 19 | 28502 | -- | -- |
| 176.55 | 0.619 | 11.7 | 0.985 | -- | -2.03 | -- | 7.8 | -0.507 | -- | 26.51 | 4452 | -- | -- |
| 184.33 | 0.636 | 12.1 | -1.59 | 1.24 | -- | 0.0415 | -- | -1.21 | 20.5 | -- | -- | -- | -- |
| 184.33 | 0.636 | 12.1 | -1.59 | 1.24 | -- | -- | -- | -1.21 | 20.5 | -- | -- | -- | -- |
| 175.92 | 0.618 | 11.8 | 1.24 | -- | -2.74 | -- | -- | -0.257 | -- | 18.95 | 28805 | -- | -- |
| 100.89 | 0.468 | 11.9 | -- | 1.34 | -2.07 | -- | -- | -0.364 | 20.7 | 19.6 | 21303 | -- | -- |
| 270 | 0.768 | 12 | -1.6 | -- | -- | -- | -- | -1.23 | -- | -- | -- | -- | -- |
| 251.27 | 0.742 | 12 | -- | 1.24 | -- | -- | -- | -1.04 | 20.4 | -- | -- | -- | -- |
| 186.51 | 0.636 | 11.8 | -- | -- | -2.03 | -- | -- | -0.48 | -- | 19.8 | 21624 | -- | -- |
| 337.45 | 0.857 | 12 | -- | -- | -- | -- | -- | -1.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.52 | radiation | 40 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 3 | 71.57 | radiation | 40 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 4 | 71.58 | radiation | 40 | 43200 | < th | dose independent | rect. | 16 | 16 |
| 7 | 71.61 | radiation | 40 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 10 | 71.69 | radiation | 40 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 12 | 71.80 | temperature | 15 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 14 | 71.83 | radiation | 40 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 16 | 71.91 | temperature | 15 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 17 | 71.91 | radiation | 40 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 19 | 72.05 | temperature | 15 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 23 | 72.13 | temperature | 15 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 50 | 73.04 | radiation | 30 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 78 | 73.55 | radiation | 1 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 82 | 73.70 | radiation | 1 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 83 | 73.70 | radiation | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 111 | 74.25 | humidity | 90 | 43200 | > th | dose dependent | rect. | 24 | 17 |
| 178 | 75.16 | humidity | 90 | 43200 | > th | dose dependent | sin | 5 | NA |
| 180 | 75.18 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 5 |
| 220 | 75.55 | humidity | 90 | 43200 | > th | dose dependent | rect. | 11 | 21 |
| 236 | 75.67 | temperature | 15 | 43200 | > th | dose independent | rect. | 23 | 13 |
| 246 | 75.73 | radiation | 1 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 271 | 75.83 | temperature | 15 | 43200 | < th | dose independent | rect. | 23 | 13 |
| 272 | 75.84 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 277 | 75.85 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 8 |
| 281 | 75.87 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 285 | 75.88 | humidity | 80 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 314 | 75.98 | temperature | 15 | 43200 | < th | dose dependent | sin | 10 | NA |
| 315 | 75.98 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 334 | 76.04 | radiation | 1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 345 | 76.09 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 378 | 76.24 | temperature | 15 | 43200 | > th | dose independent | sin | 9 | NA |
| 395 | 76.29 | humidity | 80 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 431 | 76.40 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 23 |
| 451 | 76.46 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 470 | 76.54 | temperature | 15 | 43200 | < th | dose independent | sin | 9 | NA |
| 521 | 76.77 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 19 |
| 555 | 76.93 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 14 |
| 593 | 77.09 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 10 |
| 599 | 77.10 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 617 | 77.15 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 8 |
| 645 | 77.24 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 14 |
| 661 | 77.31 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 22 |
| 669 | 77.34 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 717 | 77.50 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 727 | 77.52 | humidity | 90 | 43200 | > th | dose independent | rect. | 16 | 23 |
| 735 | 77.55 | humidity | 90 | 43200 | > th | dose independent | no | NA | NA |
| 773 | 77.65 | temperature | 15 | 43200 | > th | dose independent | rect. | 10 | 19 |
| 781 | 77.67 | humidity | 90 | 43200 | > th | dose independent | sin | 17 | NA |
| 834 | 77.82 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 929 | 78.11 | temperature | 15 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 991 | 78.29 | temperature | 15 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 994 | 78.29 | humidity | 90 | 43200 | > th | dose dependent | sin | 15 | NA |