Os08g0526700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UBA-like domain containing protein.
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Os08g0526700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UBA-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 246.89 | 0.738 | 6.1 | -5.02 | 0.395 | 2.03 | 0.729 | -1.88 | -0.633 | 2.41 | 18.78 | 1448 | -- | -- |
| 250.23 | 0.737 | 6.04 | -4.51 | 0.392 | 2.05 | 0.601 | -- | -0.491 | 2.39 | 18 | 1437 | -- | -- |
| 248.75 | 0.735 | 6.1 | -5 | 0.4 | 2.03 | -- | -1.73 | -0.624 | 2.66 | 18.67 | 1447 | -- | -- |
| 251.71 | 0.739 | 6.04 | -4.53 | 0.382 | 2.05 | -- | -- | -0.494 | 2.64 | 18 | 1431 | -- | -- |
| 255.06 | 0.744 | 6.1 | -4.97 | -- | 2.16 | -- | -1.68 | -0.623 | -- | 18.63 | 1296 | -- | -- |
| 355.44 | 0.884 | 5.93 | -3.76 | 0.512 | -- | 0.762 | -- | -0.0376 | 2.44 | -- | -- | -- | -- |
| 357.51 | 0.885 | 5.94 | -3.78 | 0.516 | -- | -- | -- | -0.0424 | 2.63 | -- | -- | -- | -- |
| 258.25 | 0.748 | 6.04 | -4.7 | -- | 2.36 | -- | -- | -0.518 | -- | 14.43 | 2657 | -- | -- |
| 718.64 | 1.25 | 5.87 | -- | 0.339 | 0.649 | -- | -- | 0.263 | 2.39 | 22.2 | 1279 | -- | -- |
| 373.09 | 0.903 | 5.93 | -3.76 | -- | -- | -- | -- | -0.0293 | -- | -- | -- | -- | -- |
| 734.03 | 1.27 | 5.84 | -- | 0.443 | -- | -- | -- | 0.379 | 2.52 | -- | -- | -- | -- |
| 725.12 | 1.25 | 5.88 | -- | -- | 0.677 | -- | -- | 0.264 | -- | 22.1 | 1225 | -- | -- |
| 745.55 | 1.27 | 5.84 | -- | -- | -- | -- | -- | 0.388 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 244.10 | temperature | 15 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 9 | 244.59 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 42 | 245.35 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 21 |
| 49 | 245.49 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 21 |
| 65 | 245.66 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 67 | 245.66 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 21 |
| 104 | 246.03 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 129 | 246.24 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 131 | 246.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 187 | 246.57 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 261 | 247.09 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 356 | 247.54 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 412 | 247.74 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 422 | 247.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 548 | 248.33 | wind | 5 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 610 | 248.54 | wind | 5 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 649 | 248.66 | wind | 5 | 43200 | > th | dose independent | sin | 3 | NA |
| 739 | 248.99 | wind | 5 | 43200 | > th | dose dependent | rect. | 2 | 13 |
| 745 | 249.02 | wind | 5 | 43200 | < th | dose independent | sin | 3 | NA |
| 820 | 249.33 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 826 | 249.35 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 22 |
| 876 | 249.60 | wind | 5 | 43200 | > th | dose dependent | sin | 4 | NA |
| 886 | 249.64 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |
| 905 | 249.71 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 915 | 249.73 | wind | 5 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 953 | 249.93 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 23 |
| 965 | 249.99 | wind | 5 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 967 | 250.00 | wind | 5 | 43200 | > th | dose independent | rect. | 7 | 23 |
| 983 | 250.05 | wind | 5 | 43200 | > th | dose independent | rect. | 4 | 23 |
| 991 | 250.08 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 23 |