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Os08g0526400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Nitrate-induced NOI family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0224) R2 : 0.732
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.36 (0.053) R2dC : 0.384 R2C : 0.398
β3 : -1.88 (0.0872) R2dE : 0.302 R2E : 0.343
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.164 (0.0483) R2dN8 : 0.0076 R2N8 : 0.0288
σ : 0.416
deviance : 79.85
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C
peak time of C : 23.1
E
wheather : temperature
threshold : 18.1
memory length : 10398
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
69.34 0.391 11 0.366 1.34 -0.838 0.848 2.67 0.194 23 19.4 3552 -- --
74.71 0.403 10.9 0.777 1.31 -1.48 1.13 -- 0.353 22.7 18.72 2774 -- --
70.48 0.391 11 0.388 1.38 -0.873 -- 2.65 0.198 23 19.01 3000 -- --
75.46 0.405 10.9 0.662 1.35 -1.59 -- -- 0.285 23 18.6 2986 -- --
178.22 0.622 11 0.291 -- -1.09 -- 2.54 0.143 -- 19.42 2333 -- --
109.16 0.49 10.8 1.45 1.37 -- 0.752 -- 0.583 23.1 -- -- -- --
111.56 0.495 10.8 1.41 1.36 -- -- -- 0.58 23.1 -- -- -- --
180.18 0.625 10.9 0.667 -- -1.63 -- -- 0.26 -- 19.04 2316 -- --
79.85 0.416 10.9 -- 1.36 -1.88 -- -- 0.164 23.1 18.1 10398 -- --
227.38 0.705 10.8 1.45 -- -- -- -- 0.592 -- -- -- -- --
164.25 0.6 10.9 -- 1.38 -- -- -- 0.423 23.2 -- -- -- --
188.04 0.639 10.9 -- -- -1.74 -- -- 0.17 -- 16.57 24013 -- --
282.52 0.785 10.9 -- -- -- -- -- 0.431 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 69.33 temperature 20 4320 > th dose independent rect. 17 7
2 69.44 temperature 20 4320 < th dose independent rect. 17 7
12 69.76 humidity 50 43200 < th dose independent rect. 19 14
16 69.86 humidity 50 43200 < th dose independent rect. 8 1
20 69.98 humidity 50 43200 > th dose independent rect. 19 14
25 70.06 humidity 50 43200 > th dose independent rect. 7 2
62 70.70 wind 5 43200 > th dose independent rect. 8 2
63 70.72 wind 5 43200 < th dose independent rect. 8 2
75 70.83 wind 3 43200 > th dose dependent rect. 8 2
76 70.84 temperature 20 4320 > th dose independent sin 16 NA
83 70.94 temperature 20 4320 < th dose independent sin 16 NA
85 70.94 humidity 50 43200 > th dose independent rect. 2 7
102 71.08 wind 9 43200 < th dose dependent rect. 8 1
141 71.33 temperature 20 1440 < th dose independent rect. 22 16
152 71.40 humidity 60 43200 < th dose dependent rect. 20 13
157 71.42 temperature 10 43200 < th dose dependent rect. 3 1
163 71.47 temperature 20 1440 > th dose independent rect. 22 16
231 71.74 wind 5 43200 > th dose dependent rect. 18 16
247 71.79 wind 7 43200 < th dose independent rect. 19 14
271 71.83 wind 7 43200 > th dose independent rect. 19 15
279 71.85 temperature 20 14400 < th dose independent rect. 22 1
312 71.90 temperature 20 1440 < th dose independent sin 6 NA
319 71.91 humidity 90 14400 > th dose dependent rect. 5 2
321 71.92 temperature 20 4320 > th dose independent rect. 18 1
327 71.92 wind 3 43200 < th dose dependent rect. 6 18
328 71.93 temperature 20 1440 > th dose independent rect. 6 1
343 71.95 wind 3 43200 < th dose dependent rect. 6 6
355 71.98 temperature 20 1440 > th dose independent sin 6 NA
372 72.00 wind 9 43200 < th dose dependent rect. 6 6
377 72.01 temperature 20 4320 > th dose independent rect. 6 20
406 72.04 wind 3 43200 < th dose dependent rect. 6 9
428 72.07 temperature 20 1440 < th dose independent rect. 5 2
484 72.14 wind 5 43200 > th dose dependent sin 10 NA
503 72.18 temperature 20 4320 < th dose independent rect. 18 1
524 72.20 humidity 90 14400 > th dose dependent rect. 3 12
541 72.22 wind 3 43200 < th dose dependent rect. 8 3
551 72.23 temperature 20 14400 < th dose independent rect. 13 20
561 72.24 wind 3 43200 < th dose independent rect. 6 11
564 72.24 wind 3 43200 < th dose independent rect. 6 15
591 72.27 temperature 10 43200 > th dose independent rect. 4 1
598 72.27 humidity 50 43200 < th dose dependent rect. 7 2
603 72.28 temperature 10 43200 < th dose independent rect. 4 1
604 72.28 humidity 70 43200 < th dose independent rect. 24 1
653 72.32 wind 3 43200 > th dose independent rect. 6 11
659 72.32 humidity 90 14400 > th dose dependent rect. 2 15
660 72.33 humidity 80 43200 > th dose independent rect. 6 1
671 72.34 wind 7 43200 > th dose independent sin 10 NA
672 72.34 wind 7 43200 < th dose independent sin 10 NA
677 72.34 wind 3 43200 > th dose independent rect. 6 14
686 72.35 radiation 20 4320 < th dose independent rect. 17 14
696 72.35 radiation 10 4320 > th dose dependent rect. 17 14
755 72.39 temperature 20 14400 > th dose independent rect. 12 21
792 72.42 wind 9 43200 < th dose independent rect. 22 3
812 72.43 wind 9 43200 < th dose independent rect. 16 19
833 72.44 temperature 20 14400 < th dose independent rect. 18 23
899 72.48 temperature 20 14400 < th dose independent no NA NA
924 72.49 wind 9 43200 > th dose independent rect. 16 18