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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0521600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Dehydration responsive element binding protein 2C (DREB2C protein).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.17 (0.0197) R2 : 0.00189
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0387 (0.0416) R2dN8 : 0.00245 R2N8 : 0.00189
σ : 0.372
deviance : 63.43
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
61 0.364 3.35 0.367 0.109 -22.1 -0.234 -44.8 -0.0368 6.2 15 90 -- --
61.24 0.367 3.17 -0.0353 0.112 -0.841 -0.21 -- -0.0408 6.61 15 90 -- --
61.1 0.364 3.36 0.373 0.111 -22 -- -44.7 -0.0354 7.03 15.1 82 -- --
61.11 0.364 3.17 -0.0196 0.111 -0.835 -- -- -0.0366 6.76 14.76 131 -- --
61.74 0.366 3.36 0.376 -- -22 -- -44.7 -0.0336 -- 15.13 83 -- --
62.57 0.371 3.17 -0.0696 0.104 -- -0.28 -- -0.0498 5.61 -- -- -- --
62.7 0.371 3.17 -0.07 0.108 -- -- -- -0.0483 6.77 -- -- -- --
61.74 0.366 3.17 -0.019 -- -0.833 -- -- -0.0335 -- 14.76 168 -- --
61.11 0.364 3.17 -- 0.11 -0.86 -- -- -0.0332 7.06 14.8 175 -- --
63.31 0.372 3.17 -0.0676 -- -- -- -- -0.0462 -- -- -- -- --
62.83 0.371 3.17 -- 0.108 -- -- -- -0.0405 6.81 -- -- -- --
61.75 0.366 3.17 -- -- -0.843 -- -- -0.0313 -- 14.85 258 -- --
63.43 0.372 3.17 -- -- -- -- -- -0.0387 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 57.00 temperature 15.0 30 > th dose independent rect. 3 23
3 57.67 atmosphere 1000.0 30 > th dose independent rect. 3 23
4 57.78 radiation 1.0 14400 < th dose dependent rect. 3 1
5 57.79 atmosphere 1005.0 90 > th dose dependent rect. 2 1
18 57.93 wind 9.0 1440 < th dose independent rect. 3 1
19 57.93 temperature 10.0 1440 > th dose independent rect. 3 1
22 57.93 temperature 30.0 1440 < th dose independent rect. 3 1
26 57.93 humidity 50.0 1440 > th dose independent rect. 3 1
35 57.93 atmosphere 995.0 1440 > th dose independent rect. 3 1
36 57.93 radiation 1.0 1440 < th dose independent rect. 3 1
56 57.93 temperature 10.0 1440 > th dose independent rect. 4 23
59 57.93 atmosphere 1005.0 10 > th dose dependent rect. 2 1
69 57.96 temperature 20.0 30 > th dose independent rect. 2 1
71 57.96 atmosphere 1005.0 30 > th dose independent rect. 2 1
73 57.97 wind 3.0 30 < th dose independent rect. 2 1
74 57.97 temperature 25.0 90 > th dose dependent rect. 2 1
82 58.00 temperature 15.0 30 > th dose dependent rect. 2 1
84 58.01 humidity 80.0 30 > th dose independent rect. 2 1
86 58.01 wind 7.0 30 < th dose dependent rect. 2 1
91 58.02 temperature 10.0 30 > th dose independent rect. 2 1
93 58.02 temperature 30.0 30 < th dose independent rect. 2 1
94 58.02 humidity 50.0 30 > th dose independent rect. 2 1
98 58.02 atmosphere 1010.0 30 < th dose independent rect. 2 1
100 58.02 radiation 1.0 30 < th dose independent rect. 2 1
105 58.02 precipitation 0.1 30 < th dose independent rect. 2 1
108 58.02 humidity 50.0 30 > th dose dependent rect. 2 1
109 58.02 radiation 1.0 30 < th dose dependent rect. 2 1
114 58.02 precipitation 0.1 30 < th dose dependent rect. 2 1
119 58.04 wind 1.0 30 > th dose independent rect. 2 1
125 58.07 temperature 30.0 30 < th dose dependent rect. 2 1
126 58.07 atmosphere 1015.0 30 < th dose dependent rect. 2 1
133 58.12 precipitation 0.1 30 < th dose independent rect. 3 23
135 58.12 precipitation 0.1 30 < th dose dependent rect. 3 23
171 58.21 wind 9.0 30 < th dose independent rect. 3 23
195 59.03 atmosphere 1010.0 30 < th dose independent rect. 3 23
205 59.48 humidity 50.0 30 > th dose independent rect. 3 23
210 59.60 radiation 30.0 30 < th dose independent rect. 3 8
215 59.72 temperature 10.0 30 > th dose dependent rect. 3 23
221 59.84 atmosphere 1005.0 30 > th dose independent rect. 3 8
224 59.91 radiation 20.0 30 < th dose dependent rect. 3 23
232 60.00 humidity 90.0 90 < th dose independent rect. 2 1
233 60.00 wind 1.0 30 < th dose independent rect. 2 4
236 60.00 temperature 15.0 10 > th dose independent rect. 14 12
238 60.00 temperature 15.0 270 > th dose independent rect. 24 23
240 60.01 radiation 40.0 30 < th dose dependent rect. 3 8
242 60.03 temperature 15.0 720 > th dose independent rect. 13 2
245 60.04 atmosphere 1005.0 270 > th dose dependent rect. 23 4
250 60.08 temperature 30.0 30 < th dose independent rect. 3 23
251 60.09 humidity 90.0 90 < th dose independent rect. 1 4
253 60.10 humidity 70.0 270 > th dose independent rect. 10 1
264 60.17 atmosphere 1015.0 30 < th dose independent rect. 11 16
270 60.18 radiation 40.0 90 < th dose independent rect. 11 16
271 60.19 temperature 25.0 270 > th dose independent rect. 23 4
280 60.20 atmosphere 1010.0 30 < th dose independent rect. 3 8
285 60.21 humidity 50.0 30 > th dose dependent rect. 3 8
289 60.23 radiation 10.0 30 < th dose independent rect. 3 23
290 60.24 temperature 25.0 10 < th dose independent rect. 22 5
294 60.25 atmosphere 995.0 30 > th dose dependent rect. 3 8
296 60.26 temperature 15.0 1440 > th dose independent rect. 10 15
300 60.28 temperature 15.0 270 > th dose independent rect. 12 23
331 60.31 humidity 60.0 30 > th dose independent rect. 11 16
333 60.32 atmosphere 1010.0 30 < th dose independent rect. 3 6
336 60.32 temperature 15.0 1440 > th dose independent rect. 12 16
349 60.35 wind 1.0 30 < th dose independent rect. 24 3
351 60.35 temperature 15.0 1440 > th dose independent rect. 8 17
356 60.36 wind 9.0 30 < th dose dependent rect. 3 23
359 60.37 atmosphere 1015.0 1440 < th dose independent rect. 1 9
363 60.38 precipitation 0.1 720 < th dose independent rect. 23 16
366 60.38 precipitation 0.1 720 < th dose dependent rect. 23 16
368 60.39 temperature 15.0 1440 > th dose independent rect. 10 18
372 60.40 radiation 40.0 90 < th dose independent rect. 9 18
373 60.40 wind 1.0 10 < th dose independent rect. 6 21
380 60.41 precipitation 0.1 30 < th dose independent rect. 11 16
385 60.41 precipitation 0.1 30 < th dose dependent rect. 11 16
386 60.42 humidity 70.0 10 > th dose independent rect. 3 7
389 60.42 atmosphere 1015.0 1440 < th dose independent rect. 1 7
390 60.42 temperature 15.0 90 > th dose independent rect. 3 8
394 60.42 humidity 70.0 30 > th dose dependent rect. 22 5
401 60.44 atmosphere 1015.0 1440 < th dose independent rect. 1 5
402 60.44 atmosphere 1015.0 30 < th dose independent rect. 22 5
403 60.44 temperature 15.0 720 > th dose independent rect. 11 6
406 60.44 temperature 30.0 30 < th dose independent rect. 3 8
409 60.45 wind 1.0 10 < th dose independent rect. 13 14
413 60.46 atmosphere 1015.0 30 < th dose independent rect. 20 7
414 60.46 wind 9.0 30 < th dose independent rect. 3 8
417 60.46 humidity 50.0 30 > th dose independent rect. 3 8
420 60.46 temperature 10.0 30 > th dose independent rect. 11 16
422 60.46 temperature 15.0 1440 > th dose independent rect. 8 20
424 60.46 atmosphere 995.0 30 > th dose dependent rect. 20 7
426 60.46 radiation 40.0 90 < th dose dependent rect. 11 16
433 60.47 humidity 50.0 30 > th dose dependent rect. 11 16
434 60.48 humidity 90.0 1440 > th dose independent rect. 13 1
437 60.48 radiation 10.0 30 < th dose independent rect. 3 5
440 60.48 wind 1.0 30 < th dose independent rect. 2 10
456 60.50 atmosphere 995.0 30 > th dose independent rect. 3 17
457 60.50 humidity 90.0 10 > th dose independent rect. 3 19
458 60.50 atmosphere 1010.0 30 < th dose independent rect. 3 19
460 60.50 wind 3.0 30 < th dose dependent rect. 2 5
461 60.51 humidity 90.0 1440 > th dose independent rect. 11 3
480 60.52 temperature 15.0 720 > th dose independent rect. 7 8
482 60.52 precipitation 0.1 30 < th dose independent rect. 3 8
483 60.52 wind 1.0 10 < th dose independent rect. 17 10
487 60.52 precipitation 0.1 30 < th dose dependent rect. 3 8
492 60.53 humidity 90.0 10 > th dose independent rect. 3 7
497 60.53 temperature 15.0 270 > th dose independent rect. 10 23
498 60.53 humidity 90.0 1440 > th dose dependent rect. 11 3
499 60.53 wind 5.0 10 < th dose dependent rect. 22 5
505 60.54 temperature 15.0 1440 > th dose independent rect. 21 7
512 60.54 precipitation 0.1 720 < th dose independent rect. 3 16
518 60.54 wind 9.0 30 < th dose dependent rect. 20 7
520 60.54 precipitation 0.1 720 < th dose dependent rect. 3 16
521 60.54 humidity 90.0 10 > th dose dependent rect. 3 19
537 60.56 temperature 15.0 1440 > th dose independent rect. 15 8
542 60.56 atmosphere 1010.0 30 < th dose independent rect. 3 17
543 60.56 atmosphere 995.0 30 > th dose independent rect. 3 19
550 60.57 temperature 15.0 1440 > th dose independent rect. 14 14
551 60.57 wind 9.0 30 < th dose independent rect. 11 16
560 60.58 humidity 60.0 4320 > th dose independent rect. 18 2
561 60.58 humidity 60.0 4320 < th dose independent rect. 18 2
571 60.58 humidity 60.0 4320 > th dose independent rect. 18 10
583 60.58 humidity 60.0 30 > th dose dependent rect. 20 7
592 60.59 atmosphere 1015.0 30 < th dose independent rect. 9 18
603 60.59 temperature 10.0 30 > th dose dependent rect. 3 8
609 60.60 humidity 60.0 4320 > th dose independent rect. 18 7
612 60.60 temperature 15.0 270 > th dose independent rect. 20 13
613 60.60 temperature 15.0 720 > th dose independent rect. 3 17
631 60.61 atmosphere 1010.0 10 < th dose independent rect. 16 17
632 60.61 humidity 60.0 1440 < th dose dependent rect. 18 1
651 60.62 wind 1.0 30 < th dose independent rect. 4 2
652 60.62 humidity 90.0 720 < th dose independent rect. 13 2
722 60.63 atmosphere 1015.0 720 < th dose independent rect. 3 8
727 60.63 precipitation 0.1 720 > th dose independent rect. 6 13
736 60.63 humidity 90.0 1440 > th dose dependent rect. 13 1
737 60.63 temperature 30.0 30 < th dose dependent rect. 22 5
751 60.64 humidity 90.0 10 > th dose independent rect. 3 17
763 60.65 humidity 90.0 10 > th dose independent rect. 3 5
765 60.65 temperature 20.0 30 > th dose independent rect. 3 6
766 60.65 wind 9.0 720 < th dose independent rect. 3 8
767 60.65 temperature 10.0 1440 > th dose independent rect. 4 8
770 60.65 atmosphere 995.0 1440 > th dose independent rect. 4 8
780 60.65 temperature 15.0 90 > th dose independent rect. 3 17
795 60.66 temperature 15.0 270 > th dose independent rect. 15 14
802 60.66 humidity 60.0 270 > th dose dependent rect. 9 2
811 60.67 temperature 15.0 1440 > th dose independent rect. 17 4
813 60.67 wind 5.0 30 < th dose independent rect. 20 7
821 60.67 atmosphere 1005.0 30 > th dose independent rect. 3 14
824 60.67 wind 9.0 30 < th dose independent rect. 3 17
848 60.68 atmosphere 1005.0 30 > th dose independent rect. 20 7
862 60.68 temperature 10.0 30 > th dose dependent rect. 3 6
868 60.69 temperature 15.0 1440 > th dose independent rect. 11 1
869 60.69 atmosphere 1015.0 1440 < th dose independent rect. 3 1
873 60.69 temperature 15.0 1440 > th dose independent rect. 12 13
878 60.69 temperature 15.0 270 > th dose independent rect. 18 23
894 60.70 precipitation 0.1 720 < th dose independent rect. 15 8
896 60.70 temperature 30.0 720 < th dose independent rect. 18 9
899 60.70 humidity 90.0 10 > th dose independent rect. 3 11
905 60.70 wind 9.0 30 < th dose independent rect. 3 19
910 60.70 wind 1.0 43200 < th dose dependent rect. 9 1
916 60.70 wind 9.0 30 < th dose dependent rect. 3 8
918 60.70 precipitation 0.1 720 < th dose dependent rect. 15 8
919 60.70 precipitation 0.1 720 > th dose dependent rect. 6 13
926 60.71 atmosphere 1010.0 30 < th dose independent rect. 3 4
927 60.71 wind 5.0 30 < th dose independent rect. 22 5
931 60.71 temperature 15.0 270 > th dose independent rect. 14 18
940 60.71 humidity 90.0 10 > th dose dependent rect. 3 17
979 60.72 atmosphere 995.0 30 > th dose dependent rect. 3 17
986 60.73 humidity 90.0 10 > th dose independent rect. 3 3