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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0517100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to ASYMMETRIC LEAVES2 protein (LOB domain protein 36).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.89 (0.0361) R2 : 0.00496
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.114 (0.0759) R2dN8 : 0.0064 R2N8 : 0.00496
σ : 0.679
deviance : 211.67
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
203.71 0.671 2.91 -0.369 0.121 0.807 0.339 -2.77 -0.109 5.32 30 121 -- --
204.73 0.666 2.88 -0.125 0.12 0.509 0.541 -- -0.0933 4.8 29.89 131 -- --
203.96 0.665 2.91 -0.37 0.118 0.788 -- -2.83 -0.114 5.89 30 121 -- --
205.19 0.667 2.88 -0.128 0.109 0.481 -- -- -0.101 6.03 29.9 131 -- --
204.59 0.666 2.91 -0.357 -- 0.732 -- -2.83 -0.112 -- 30 121 -- --
211.07 0.681 2.89 -0.0554 0.0757 -- -0.195 -- -0.119 13.9 -- -- -- --
211.21 0.681 2.89 -0.0615 0.0753 -- -- -- -0.12 13.6 -- -- -- --
205.81 0.668 2.89 -0.118 -- 0.416 -- -- -0.0999 -- 29.9 131 -- --
205.63 0.668 2.88 -- 0.116 0.463 -- -- -0.0909 6.09 29.8 131 -- --
211.56 0.68 2.89 -0.0645 -- -- -- -- -0.122 -- -- -- -- --
211.31 0.68 2.89 -- 0.0764 -- -- -- -0.113 13.7 -- -- -- --
206.18 0.669 2.88 -- -- 0.405 -- -- -0.0894 -- 29.84 131 -- --
211.67 0.679 2.89 -- -- -- -- -- -0.114 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 200.04 temperature 30 270 > th dose independent rect. 9 2
18 200.43 atmosphere 1000 10 < th dose independent rect. 23 16
21 200.63 temperature 25 10 > th dose dependent rect. 9 1
23 200.72 atmosphere 1005 10 < th dose independent rect. 20 1
25 200.94 temperature 30 90 > th dose independent rect. 9 8
47 201.61 temperature 30 90 > th dose dependent rect. 18 17
63 201.78 temperature 30 90 > th dose dependent sin 9 NA
67 201.87 atmosphere 1000 10 < th dose independent rect. 5 1
74 201.87 atmosphere 1000 10 < th dose dependent rect. 5 1
89 201.93 temperature 30 90 > th dose independent rect. 14 1
91 201.98 atmosphere 1000 10 < th dose independent rect. 5 10
92 201.99 temperature 30 90 > th dose independent rect. 9 5
102 202.16 humidity 90 10 > th dose dependent rect. 20 1
106 202.23 atmosphere 1000 10 < th dose independent rect. 18 21
109 202.32 temperature 30 90 > th dose independent sin 1 NA
141 202.42 radiation 20 10 > th dose independent rect. 7 3
192 202.49 temperature 30 10 > th dose dependent rect. 16 22
193 202.51 temperature 25 30 > th dose independent rect. 9 1
218 202.62 temperature 30 90 > th dose dependent rect. 16 21
242 202.69 wind 3 720 < th dose dependent rect. 22 1
244 202.70 wind 1 720 < th dose dependent rect. 20 4
256 202.78 temperature 20 90 > th dose dependent rect. 11 23
294 202.98 temperature 30 270 < th dose independent sin 9 NA
296 203.00 wind 1 720 < th dose independent rect. 22 1
300 203.06 temperature 30 10 > th dose dependent sin 7 NA
302 203.08 temperature 30 270 > th dose independent sin 9 NA
334 203.20 temperature 30 90 < th dose independent sin 0 NA
335 203.20 temperature 30 90 < th dose independent rect. 20 23
341 203.22 temperature 30 90 < th dose independent rect. 3 11
379 203.31 temperature 20 90 > th dose dependent rect. 18 23
382 203.34 atmosphere 995 30 > th dose dependent rect. 3 23
384 203.35 atmosphere 1000 10 < th dose independent sin 4 NA
385 203.35 atmosphere 1000 10 < th dose independent rect. 23 21
412 203.40 temperature 30 90 < th dose dependent rect. 20 22
416 203.44 atmosphere 1000 10 > th dose independent sin 4 NA
428 203.53 temperature 25 1440 < th dose independent rect. 19 2
438 203.57 temperature 30 10 > th dose dependent rect. 9 5
448 203.57 atmosphere 1000 90 < th dose dependent rect. 22 14
454 203.58 temperature 30 90 < th dose independent rect. 9 9
465 203.64 atmosphere 1000 10 < th dose independent rect. 5 22
467 203.64 temperature 20 90 > th dose dependent rect. 4 23
484 203.72 temperature 30 90 < th dose independent rect. 8 23
492 203.74 atmosphere 1000 10 < th dose independent rect. 9 22
493 203.74 temperature 30 30 > th dose independent rect. 16 23
518 203.78 temperature 30 10 > th dose independent rect. 9 9
534 203.79 temperature 30 1440 < th dose independent rect. 10 1
537 203.79 temperature 30 90 < th dose independent rect. 3 23
544 203.81 temperature 25 270 < th dose independent rect. 20 19
548 203.84 atmosphere 1005 1440 > th dose independent rect. 18 1
549 203.84 atmosphere 1000 10 < th dose independent rect. 9 6
556 203.87 temperature 20 10 > th dose dependent rect. 19 23
559 203.88 humidity 80 270 < th dose independent rect. 7 1
580 203.91 temperature 30 10 > th dose independent sin 2 NA
584 203.93 temperature 30 1440 > th dose independent rect. 10 1
614 203.96 temperature 20 90 > th dose dependent rect. 22 23
625 203.99 temperature 25 1440 > th dose independent rect. 18 3
630 203.99 atmosphere 995 30 > th dose dependent rect. 8 23
634 204.00 wind 1 90 < th dose dependent rect. 14 1
640 204.02 atmosphere 1000 30 > th dose independent rect. 3 23
641 204.02 temperature 30 30 < th dose dependent rect. 3 23
642 204.03 radiation 20 10 > th dose independent sin 10 NA
643 204.03 wind 9 14400 > th dose independent rect. 11 1
672 204.06 temperature 25 4320 > th dose independent rect. 20 1
679 204.07 atmosphere 1005 1440 < th dose independent rect. 17 2
698 204.09 temperature 20 90 > th dose dependent no NA NA
748 204.16 temperature 20 90 > th dose dependent rect. 22 19
759 204.18 temperature 25 4320 < th dose independent rect. 12 15
763 204.19 atmosphere 1005 1440 < th dose independent rect. 15 5
767 204.20 temperature 30 90 < th dose dependent rect. 8 22
768 204.20 temperature 20 90 > th dose dependent rect. 1 23
778 204.22 temperature 30 90 > th dose independent no NA NA
920 204.26 temperature 30 1440 < th dose independent rect. 3 8
922 204.26 humidity 70 90 < th dose independent rect. 14 18
927 204.27 atmosphere 1005 1440 > th dose independent rect. 15 5
931 204.27 temperature 20 90 > th dose dependent rect. 1 16
932 204.27 wind 9 14400 > th dose dependent rect. 21 20
937 204.28 temperature 20 1440 > th dose dependent rect. 23 1
942 204.29 wind 9 14400 > th dose dependent rect. 6 11
947 204.30 wind 9 14400 > th dose dependent rect. 9 8
953 204.31 temperature 30 1440 < th dose independent rect. 20 15
961 204.32 temperature 25 4320 > th dose independent rect. 13 13
967 204.33 wind 9 14400 < th dose independent rect. 11 1