Os08g0508600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0508600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.16 | 0.388 | 11 | 0.0623 | 1.64 | 1.4 | 0.366 | -1.12 | -0.104 | 16.8 | 18 | 66 | -- | -- |
| 69.17 | 0.387 | 10.9 | 0.248 | 1.64 | 1.37 | 0.063 | -- | -0.0508 | 16.7 | 17.86 | 64 | -- | -- |
| 68.43 | 0.385 | 11 | 0.104 | 1.63 | 1.41 | -- | -0.861 | -0.0928 | 16.7 | 18 | 65 | -- | -- |
| 69.18 | 0.387 | 10.9 | 0.249 | 1.64 | 1.37 | -- | -- | -0.0495 | 16.7 | 17.9 | 64 | -- | -- |
| 165.38 | 0.599 | 11 | -0.31 | -- | 2.71 | -- | -1.2 | -0.355 | -- | 18.93 | 148 | -- | -- |
| 94.57 | 0.456 | 10.9 | 0.558 | 2.06 | -- | 0.295 | -- | 0.176 | 16.3 | -- | -- | -- | -- |
| 94.81 | 0.456 | 10.9 | 0.561 | 2.06 | -- | -- | -- | 0.178 | 16.3 | -- | -- | -- | -- |
| 166.69 | 0.601 | 11 | -0.103 | -- | 2.73 | -- | -- | -0.289 | -- | 18.2 | 149 | -- | -- |
| 70.7 | 0.392 | 10.9 | -- | 1.62 | 1.47 | -- | -- | -0.0785 | 16.7 | 17.49 | 63 | -- | -- |
| 324.22 | 0.841 | 10.9 | 0.479 | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
| 103.09 | 0.475 | 10.9 | -- | 2.05 | -- | -- | -- | 0.115 | 16.3 | -- | -- | -- | -- |
| 167.01 | 0.602 | 11 | -- | -- | 2.7 | -- | -- | -0.284 | -- | 18.3 | 149 | -- | -- |
| 330.27 | 0.848 | 10.9 | -- | -- | -- | -- | -- | 0.07 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.08 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 3 | 66.51 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 4 | 66.60 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 16 |
| 7 | 67.04 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 12 | 67.30 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 15 | 67.61 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 20 | 67.94 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 30 | 68.22 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 35 | 68.31 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 46 | 68.53 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 108 | 69.60 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 121 | 69.72 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 168 | 70.20 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 18 |
| 183 | 70.30 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 21 |
| 198 | 70.48 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 223 | 70.70 | temperature | 20 | 4320 | < th | dose independent | rect. | 15 | 9 |
| 256 | 70.91 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 259 | 70.93 | temperature | 20 | 4320 | > th | dose independent | rect. | 14 | 10 |
| 297 | 71.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 20 |
| 309 | 71.20 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 345 | 71.39 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 371 | 71.52 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 429 | 71.84 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 450 | 71.93 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 500 | 72.13 | temperature | 20 | 4320 | > th | dose independent | sin | 17 | NA |
| 585 | 72.49 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 589 | 72.50 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 694 | 72.93 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 722 | 73.04 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 776 | 73.24 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 6 |
| 788 | 73.29 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 816 | 73.38 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 6 |
| 886 | 73.57 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 895 | 73.60 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 904 | 73.63 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 905 | 73.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 958 | 73.77 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 984 | 73.86 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 9 |
| 993 | 73.88 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 13 |