Os08g0506000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ovarian tumour, otubain domain containing protein.
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Os08g0506000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ovarian tumour, otubain domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.75 | 0.535 | 7.95 | -0.693 | 1.08 | 2.08 | 0.412 | -2.07 | 0.0621 | 11.9 | 22.21 | 1446 | -- | -- |
| 132.26 | 0.536 | 7.88 | -0.0806 | 1.09 | 1.97 | 0.421 | -- | 0.212 | 11.9 | 21.3 | 1448 | -- | -- |
| 130.48 | 0.532 | 7.95 | -0.679 | 1.08 | 2.08 | -- | -2.08 | 0.0615 | 11.8 | 22.16 | 1443 | -- | -- |
| 133.08 | 0.537 | 7.88 | -0.0635 | 1.06 | 1.97 | -- | -- | 0.214 | 11.8 | 21.25 | 1466 | -- | -- |
| 174.66 | 0.619 | 7.89 | 0.0786 | -- | 2.52 | -- | -0.611 | 0.265 | -- | 21.91 | 1559 | -- | -- |
| 268.23 | 0.768 | 7.77 | 0.651 | 0.967 | -- | 0.303 | -- | 0.684 | 11.5 | -- | -- | -- | -- |
| 268.62 | 0.768 | 7.77 | 0.663 | 0.966 | -- | -- | -- | 0.685 | 11.5 | -- | -- | -- | -- |
| 169.46 | 0.609 | 7.88 | 0.151 | -- | 2.55 | -- | -- | 0.27 | -- | 21.1 | 1574 | -- | -- |
| 133.16 | 0.537 | 7.87 | -- | 1.06 | 1.96 | -- | -- | 0.226 | 11.8 | 21.3 | 1466 | -- | -- |
| 327.19 | 0.845 | 7.79 | 0.637 | -- | -- | -- | -- | 0.674 | -- | -- | -- | -- | -- |
| 280.21 | 0.783 | 7.79 | -- | 0.959 | -- | -- | -- | 0.611 | 11.4 | -- | -- | -- | -- |
| 170.04 | 0.609 | 7.89 | -- | -- | 2.58 | -- | -- | 0.249 | -- | 21.1 | 1574 | -- | -- |
| 337.91 | 0.858 | 7.81 | -- | -- | -- | -- | -- | 0.604 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 127.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 4 | 128.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 5 |
| 11 | 128.46 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 9 |
| 26 | 129.10 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 36 | 129.56 | temperature | 20 | 1440 | > th | dose dependent | sin | 19 | NA |
| 49 | 129.91 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 7 |
| 79 | 130.66 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 118 | 131.29 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 17 |
| 214 | 132.15 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 17 |
| 243 | 132.39 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 17 |
| 356 | 133.23 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 418 | 133.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 424 | 133.99 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 553 | 135.12 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 14 |
| 580 | 135.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 584 | 135.43 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 639 | 135.98 | temperature | 25 | 1440 | > th | dose independent | sin | 19 | NA |
| 641 | 135.99 | temperature | 30 | 1440 | < th | dose dependent | sin | 20 | NA |
| 682 | 136.35 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 694 | 136.47 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 733 | 136.76 | temperature | 25 | 1440 | < th | dose independent | sin | 19 | NA |
| 743 | 136.83 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 827 | 137.49 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 861 | 137.67 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 892 | 137.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 912 | 137.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 959 | 138.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |