Os08g0500100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxisomal targeting sequence 1 receptor (Fragment).
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Os08g0500100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peroxisomal targeting sequence 1 receptor (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.49 | 0.207 | 12.1 | 0.132 | 0.304 | -0.563 | 0.141 | 4.32 | -0.0866 | 0.64 | 29.06 | 1148 | -- | -- |
| 20.82 | 0.214 | 12.1 | -0.659 | 0.293 | 0.064 | 0.178 | -- | -0.123 | 0.896 | 29.06 | 1148 | -- | -- |
| 19.48 | 0.206 | 12.1 | 0.0358 | 0.308 | -0.52 | -- | 3.93 | -0.0727 | 0.563 | 28.64 | 1067 | -- | -- |
| 20.58 | 0.211 | 12.2 | -0.619 | 0.298 | -0.104 | -- | -- | -0.137 | 0.836 | 33.8 | 992 | -- | -- |
| 25.06 | 0.233 | 12.1 | 0.125 | -- | -0.51 | -- | 4.46 | -0.0918 | -- | 29.38 | 1169 | -- | -- |
| 20.86 | 0.214 | 12.1 | -0.655 | 0.284 | -- | 0.17 | -- | -0.125 | 0.813 | -- | -- | -- | -- |
| 20.98 | 0.214 | 12.1 | -0.661 | 0.284 | -- | -- | -- | -0.126 | 0.874 | -- | -- | -- | -- |
| 25.38 | 0.236 | 12.1 | -0.631 | -- | -0.187 | -- | -- | -0.12 | -- | 27.11 | 13418 | -- | -- |
| 31.17 | 0.26 | 12.1 | -- | 0.31 | -0.171 | -- | -- | -0.0811 | 0.815 | 33.4 | 1009 | -- | -- |
| 26 | 0.238 | 12.1 | -0.651 | -- | -- | -- | -- | -0.12 | -- | -- | -- | -- | -- |
| 32.5 | 0.267 | 12.1 | -- | 0.273 | -- | -- | -- | -0.052 | 0.768 | -- | -- | -- | -- |
| 27.91 | 0.246 | 12.1 | -- | -- | -0.489 | -- | -- | 0.0983 | -- | 7.252 | 47520 | -- | -- |
| 37.18 | 0.285 | 12.1 | -- | -- | -- | -- | -- | -0.0482 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.49 | temperature | 25.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 2 | 18.49 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 3 | 18.49 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 20 | 11 |
| 4 | 18.51 | humidity | 90.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 5 | 18.52 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 8 | 18.53 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 10 | 18.55 | wind | 3.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 11 | 18.56 | wind | 1.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 14 | 18.60 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 16 | 18.61 | temperature | 25.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 17 | 18.63 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 20 | 18.66 | temperature | 25.0 | 10 | > th | dose independent | rect. | 2 | 3 |
| 33 | 18.70 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 34 | 18.71 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 35 | 18.71 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 38 | 18.71 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 41 | 18.71 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 43 | 18.71 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 45 | 18.71 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 50 | 18.71 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 54 | 18.71 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 55 | 18.71 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 59 | 18.71 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 64 | 18.73 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 68 | 18.73 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 73 | 18.76 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 77 | 18.77 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 93 | 18.81 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 97 | 18.81 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 101 | 18.81 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 108 | 18.81 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 118 | 18.81 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 121 | 18.81 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 127 | 18.81 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 137 | 18.81 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 160 | 18.91 | wind | 1.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 161 | 18.91 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 171 | 18.96 | radiation | 10.0 | 720 | > th | dose independent | rect. | 15 | 2 |
| 172 | 18.96 | radiation | 10.0 | 720 | > th | dose independent | rect. | 15 | 15 |
| 173 | 18.96 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 186 | 18.97 | humidity | 50.0 | 720 | > th | dose independent | rect. | 17 | 16 |
| 187 | 18.97 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 20 |
| 189 | 18.98 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 10 |
| 201 | 18.99 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 15 | 9 |
| 202 | 18.99 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 15 | 16 |
| 204 | 19.00 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 208 | 19.01 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 8 |
| 223 | 19.05 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 224 | 19.05 | temperature | 25.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 236 | 19.08 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 1 |
| 238 | 19.09 | temperature | 25.0 | 90 | > th | dose independent | rect. | 16 | 11 |
| 239 | 19.09 | temperature | 25.0 | 720 | < th | dose independent | rect. | 12 | 12 |
| 242 | 19.09 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 246 | 19.10 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 10 |
| 248 | 19.11 | temperature | 25.0 | 270 | > th | dose independent | rect. | 16 | 8 |
| 257 | 19.12 | temperature | 25.0 | 720 | > th | dose independent | rect. | 14 | 10 |
| 259 | 19.12 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 266 | 19.13 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 16 | 11 |
| 270 | 19.14 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 22 | 9 |
| 292 | 19.18 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 299 | 19.19 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 19 | 6 |
| 300 | 19.19 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 7 |
| 305 | 19.20 | temperature | 25.0 | 90 | > th | dose independent | rect. | 16 | 15 |
| 312 | 19.20 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 17 | 14 |
| 314 | 19.21 | radiation | 1.0 | 720 | < th | dose independent | sin | 22 | NA |
| 326 | 19.21 | temperature | 25.0 | 720 | > th | dose independent | rect. | 11 | 13 |
| 331 | 19.21 | radiation | 1.0 | 720 | < th | dose independent | rect. | 3 | 16 |
| 333 | 19.21 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 20 | 4 |
| 350 | 19.23 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 11 |
| 388 | 19.26 | radiation | 1.0 | 720 | > th | dose independent | sin | 16 | NA |
| 405 | 19.26 | radiation | 1.0 | 720 | > th | dose independent | rect. | 11 | 18 |
| 414 | 19.27 | temperature | 25.0 | 90 | > th | dose independent | rect. | 20 | 7 |
| 415 | 19.27 | radiation | 1.0 | 720 | > th | dose independent | rect. | 11 | 8 |
| 459 | 19.29 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 10 |
| 467 | 19.30 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 16 |
| 468 | 19.30 | radiation | 40.0 | 720 | < th | dose independent | rect. | 17 | 16 |
| 472 | 19.30 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 11 | 13 |
| 477 | 19.31 | radiation | 1.0 | 720 | < th | dose dependent | sin | 22 | NA |
| 490 | 19.32 | radiation | 1.0 | 720 | < th | dose independent | rect. | 12 | 7 |
| 503 | 19.33 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 23 |
| 505 | 19.33 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 523 | 19.33 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 8 | 11 |
| 534 | 19.33 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 545 | 19.34 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 9 | 3 |
| 556 | 19.34 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 10 | 14 |
| 559 | 19.35 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 579 | 19.35 | humidity | 90.0 | 90 | < th | dose independent | rect. | 11 | 20 |
| 590 | 19.35 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 599 | 19.36 | temperature | 25.0 | 90 | > th | dose independent | rect. | 20 | 11 |
| 615 | 19.37 | temperature | 25.0 | 720 | > th | dose independent | sin | 17 | NA |
| 618 | 19.37 | temperature | 25.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 627 | 19.37 | radiation | 1.0 | 720 | < th | dose independent | rect. | 21 | 22 |
| 630 | 19.37 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 632 | 19.37 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 637 | 19.38 | temperature | 25.0 | 720 | < th | dose independent | sin | 18 | NA |
| 638 | 19.38 | radiation | 1.0 | 720 | < th | dose independent | rect. | 15 | 4 |
| 640 | 19.38 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 660 | 19.38 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 673 | 19.39 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 676 | 19.39 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 9 |
| 721 | 19.40 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 24 | 14 |
| 738 | 19.40 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 8 | 16 |
| 763 | 19.41 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 11 | 13 |
| 767 | 19.41 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 3 | 16 |
| 768 | 19.41 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 11 | 20 |
| 790 | 19.42 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 12 | 7 |
| 796 | 19.43 | humidity | 80.0 | 720 | < th | dose independent | rect. | 15 | 2 |
| 815 | 19.43 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 21 | 22 |
| 829 | 19.44 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 15 | 7 |
| 833 | 19.44 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 834 | 19.44 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 13 | 10 |
| 837 | 19.44 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 844 | 19.45 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 861 | 19.46 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 895 | 19.47 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 901 | 19.47 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 20 |
| 913 | 19.47 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 20 | 16 |
| 971 | 19.49 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 17 |
| 975 | 19.49 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 21 |
| 976 | 19.49 | humidity | 90.0 | 90 | < th | dose independent | rect. | 9 | 22 |