Os08g0497600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os08g0497600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.37 | 0.38 | 11.2 | -1.53 | 0.741 | 0.825 | -0.438 | -0.258 | -0.238 | 10.6 | 23.59 | 10 | -- | -- |
| 65.48 | 0.377 | 11.2 | -1.54 | 0.74 | 0.829 | -0.19 | -- | -0.241 | 10.6 | 23.91 | 8 | -- | -- |
| 65.59 | 0.377 | 11.2 | -1.54 | 0.736 | 0.829 | -- | 0.0852 | -0.241 | 10.6 | 24.35 | 8 | -- | -- |
| 65.61 | 0.377 | 11.2 | -1.54 | 0.743 | 0.824 | -- | -- | -0.243 | 10.6 | 23.19 | 6 | -- | -- |
| 72.71 | 0.397 | 11.2 | -1.55 | -- | 0.482 | -- | 0.422 | -0.22 | -- | 51.02 | 218 | -- | -- |
| 78.21 | 0.415 | 11.2 | -1.57 | 0.283 | -- | -0.145 | -- | -0.249 | 4.66 | -- | -- | -- | -- |
| 78.25 | 0.414 | 11.2 | -1.57 | 0.282 | -- | -- | -- | -0.249 | 4.52 | -- | -- | -- | -- |
| 73.24 | 0.399 | 11.2 | -1.55 | -- | 0.488 | -- | -- | -0.214 | -- | 52.87 | 217 | -- | -- |
| 127.79 | 0.526 | 11.2 | -- | 0.798 | 0.905 | -- | -- | -0.0726 | 10.9 | 25.49 | 6 | -- | -- |
| 82.49 | 0.424 | 11.3 | -1.56 | -- | -- | -- | -- | -0.241 | -- | -- | -- | -- | -- |
| 143.25 | 0.56 | 11.2 | -- | 0.252 | -- | -- | -- | -0.0737 | 4.67 | -- | -- | -- | -- |
| 134.07 | 0.539 | 11.2 | -- | -- | 0.592 | -- | -- | -0.0048 | -- | 92.69 | 900 | -- | -- |
| 146.63 | 0.565 | 11.2 | -- | -- | -- | -- | -- | -0.0681 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.56 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 5 | 59.89 | radiation | 20.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 7 | 60.05 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 10 | 60.30 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 15 | 60.48 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 26 | 60.73 | radiation | 30.0 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 42 | 60.97 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 43 | 60.97 | radiation | 20.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 44 | 60.98 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 17 |
| 55 | 61.17 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 68 | 61.35 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 93 | 61.55 | radiation | 20.0 | 10 | < th | dose dependent | sin | 21 | NA |
| 99 | 61.63 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 20 |
| 100 | 61.64 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 130 | 62.00 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 141 | 62.10 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 4 |
| 161 | 62.28 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 5 | 15 |
| 178 | 62.43 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 194 | 62.54 | temperature | 25.0 | 90 | < th | dose independent | rect. | 17 | 4 |
| 202 | 62.59 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 17 | 3 |
| 228 | 62.73 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 230 | 62.73 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 18 |
| 250 | 62.83 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 8 | 12 |
| 314 | 63.08 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 6 |
| 323 | 63.11 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 6 |
| 331 | 63.13 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 15 |
| 345 | 63.21 | temperature | 25.0 | 90 | < th | dose independent | rect. | 15 | 6 |
| 357 | 63.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 362 | 63.30 | radiation | 1.0 | 270 | < th | dose independent | sin | 1 | NA |
| 366 | 63.31 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 383 | 63.36 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 6 |
| 387 | 63.39 | humidity | 80.0 | 90 | > th | dose independent | rect. | 17 | 3 |
| 396 | 63.42 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 8 |
| 423 | 63.49 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 8 | 14 |
| 426 | 63.51 | humidity | 80.0 | 10 | > th | dose independent | rect. | 18 | 2 |
| 438 | 63.54 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 444 | 63.55 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 4 |
| 449 | 63.57 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 17 |
| 465 | 63.61 | wind | 7.0 | 270 | < th | dose dependent | rect. | 15 | 4 |
| 486 | 63.66 | radiation | 10.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 495 | 63.70 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 4 |
| 509 | 63.72 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 6 |
| 526 | 63.77 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 4 |
| 549 | 63.81 | wind | 7.0 | 270 | < th | dose independent | rect. | 20 | 19 |
| 574 | 63.87 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 14 | 6 |
| 583 | 63.90 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 21 | 8 |
| 588 | 63.92 | humidity | 70.0 | 90 | > th | dose independent | rect. | 15 | 5 |
| 589 | 63.92 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 610 | 63.97 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 4 |
| 670 | 64.11 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 721 | 64.20 | radiation | 1.0 | 270 | > th | dose independent | sin | 1 | NA |
| 730 | 64.23 | humidity | 70.0 | 90 | > th | dose independent | rect. | 13 | 7 |
| 748 | 64.26 | wind | 7.0 | 270 | < th | dose independent | rect. | 9 | 16 |
| 756 | 64.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 783 | 64.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 8 |
| 785 | 64.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 818 | 64.39 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 16 |
| 824 | 64.41 | wind | 5.0 | 270 | < th | dose independent | rect. | 15 | 4 |
| 826 | 64.41 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 853 | 64.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 8 |
| 856 | 64.45 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 18 |
| 858 | 64.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 866 | 64.48 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 867 | 64.48 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 870 | 64.48 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 889 | 64.51 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 16 |
| 891 | 64.51 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 16 |
| 901 | 64.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 20 |
| 905 | 64.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 20 |
| 919 | 64.55 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 920 | 64.56 | radiation | 10.0 | 10 | < th | dose independent | sin | 22 | NA |
| 944 | 64.60 | wind | 5.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 977 | 64.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 18 |
| 979 | 64.65 | wind | 7.0 | 270 | < th | dose independent | rect. | 18 | 22 |
| 982 | 64.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 18 |
| 984 | 64.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 6 |
| 985 | 64.66 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 14 | 6 |
| 988 | 64.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 18 |
| 989 | 64.66 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 18 |