Os08g0492500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RINGv domain containing protein.
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Os08g0492500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : RINGv domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.81 | 0.541 | 10.2 | 1.3 | 1.83 | -0.795 | 0.848 | 1.55 | 0.731 | 13.3 | 20.71 | 3072 | -- | -- |
| 131.95 | 0.535 | 10.2 | 1.27 | 1.84 | -0.862 | 0.869 | -- | 0.729 | 13.3 | 12.91 | 10432 | -- | -- |
| 135.25 | 0.542 | 10.2 | 1.29 | 1.83 | -0.802 | -- | 1.56 | 0.725 | 13.3 | 21.1 | 2707 | -- | -- |
| 135.22 | 0.542 | 10.2 | 1.3 | 1.87 | -0.87 | -- | -- | 0.755 | 13.3 | 12.97 | 10407 | -- | -- |
| 306.43 | 0.82 | 10.2 | 1.59 | -- | -2.76 | -- | -1.96 | 0.743 | -- | 21.1 | 2707 | -- | -- |
| 150.88 | 0.576 | 10.1 | 1.91 | 1.82 | -- | 0.853 | -- | 0.951 | 13.2 | -- | -- | -- | -- |
| 153.87 | 0.581 | 10.1 | 1.94 | 1.82 | -- | -- | -- | 0.955 | 13.2 | -- | -- | -- | -- |
| 274.19 | 0.771 | 10.2 | 1.43 | -- | -2.4 | -- | -- | 0.596 | -- | 56.28 | 3 | -- | -- |
| 158.06 | 0.586 | 10.3 | -- | 1.85 | -1.57 | -- | -- | 0.272 | 13.2 | 125.9 | 47520 | -- | -- |
| 357.53 | 0.884 | 10.2 | 1.87 | -- | -- | -- | -- | 0.918 | -- | -- | -- | -- | -- |
| 252.81 | 0.744 | 10.2 | -- | 1.78 | -- | -- | -- | 0.74 | 13.2 | -- | -- | -- | -- |
| 324.31 | 0.839 | 10.3 | -- | -- | -2.87 | -- | -- | 0.383 | -- | 56.64 | 11 | -- | -- |
| 449.49 | 0.99 | 10.2 | -- | -- | -- | -- | -- | 0.711 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.65 | temperature | 20.0 | 30 | > th | dose independent | rect. | 14 | 18 |
| 6 | 117.78 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 14 | 120.95 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 14 | 18 |
| 22 | 121.59 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 18 |
| 32 | 122.13 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 6 |
| 38 | 122.47 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 18 |
| 43 | 122.68 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 7 |
| 45 | 122.73 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 19 |
| 78 | 123.99 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 82 | 124.07 | radiation | 1.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 103 | 124.53 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 5 |
| 115 | 124.63 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 126 | 124.82 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 128 | 124.84 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 130 | 124.84 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 131 | 124.84 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 132 | 124.84 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 6 |
| 134 | 124.84 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 6 |
| 137 | 124.89 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 18 |
| 145 | 124.96 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 148 | 125.01 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 5 |
| 158 | 125.05 | temperature | 20.0 | 90 | > th | dose independent | rect. | 22 | 10 |
| 159 | 125.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 5 |
| 160 | 125.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 5 |
| 161 | 125.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 164 | 125.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 165 | 125.09 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 170 | 125.19 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 18 |
| 173 | 125.22 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 186 | 125.31 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 5 |
| 189 | 125.34 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 190 | 125.34 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 19 |
| 191 | 125.34 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 19 |
| 196 | 125.48 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 197 | 125.48 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 198 | 125.48 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 200 | 125.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 6 |
| 203 | 125.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 6 |
| 210 | 125.59 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 213 | 125.59 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 18 |
| 219 | 125.67 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 226 | 125.70 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 232 | 125.75 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 241 | 125.78 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 14 | 18 |
| 242 | 125.78 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 14 | 18 |
| 252 | 125.87 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 3 |
| 253 | 125.88 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 21 | 8 |
| 260 | 125.95 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 21 | 7 |
| 263 | 125.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 18 |
| 269 | 126.05 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 284 | 126.13 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 289 | 126.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 18 |
| 290 | 126.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 18 |
| 294 | 126.22 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 295 | 126.22 | radiation | 1.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 305 | 126.25 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 327 | 126.37 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 9 |
| 333 | 126.39 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 348 | 126.47 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 349 | 126.47 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 356 | 126.50 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 14 | 18 |
| 361 | 126.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 16 |
| 362 | 126.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 371 | 126.55 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 372 | 126.55 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 373 | 126.55 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 376 | 126.55 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 378 | 126.55 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 383 | 126.56 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 385 | 126.57 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 386 | 126.58 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 392 | 126.66 | wind | 1.0 | 90 | > th | dose dependent | rect. | 13 | 6 |
| 401 | 126.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 8 |
| 403 | 126.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 417 | 126.81 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 424 | 126.83 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 434 | 126.85 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 446 | 126.92 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 451 | 126.94 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 21 | 8 |
| 496 | 127.13 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 500 | 127.15 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 538 | 127.25 | wind | 1.0 | 270 | > th | dose dependent | rect. | 13 | 3 |
| 544 | 127.28 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 545 | 127.28 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 18 | 9 |
| 591 | 127.46 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 615 | 127.52 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 8 |
| 630 | 127.54 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 643 | 127.58 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 653 | 127.62 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 3 |
| 662 | 127.67 | radiation | 1.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 742 | 127.87 | radiation | 40.0 | 30 | < th | dose independent | rect. | 12 | 20 |
| 759 | 127.96 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 3 |
| 776 | 128.02 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 778 | 128.02 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 12 | 5 |
| 782 | 128.03 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 5 |
| 797 | 128.11 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 6 |
| 832 | 128.23 | radiation | 1.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 854 | 128.31 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 6 |
| 856 | 128.32 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 892 | 128.41 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 22 |
| 912 | 128.49 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 20 | 12 |
| 925 | 128.52 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 945 | 128.54 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 946 | 128.54 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 947 | 128.54 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 954 | 128.55 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 959 | 128.56 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 1 |
| 962 | 128.56 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 967 | 128.59 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 978 | 128.60 | wind | 1.0 | 10 | > th | dose dependent | rect. | 14 | 5 |
| 982 | 128.61 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 5 |
| 987 | 128.61 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 5 |