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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0486700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.21 (0.0347) R2 : 0.00426
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.102 (0.073) R2dN8 : 0.0055 R2N8 : 0.00426
σ : 0.653
deviance : 195.81
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
180.68 0.632 3.21 -0.244 0.167 -0.569 -0.11 0.177 -0.116 3.33 1.1 12 -- --
180.56 0.626 3.21 -0.242 0.166 -0.57 -0.149 -- -0.119 3.33 1.132 15 -- --
180.48 0.626 3.22 -0.259 0.163 -0.6 -- 0.387 -0.122 2.9 1.152 16 -- --
180.62 0.626 3.21 -0.239 0.165 -0.568 -- -- -0.118 2.98 1.136 15 -- --
181.78 0.628 3.22 -0.268 -- -0.691 -- 0.461 -0.118 -- 1.171 16 -- --
188.81 0.644 3.21 -0.166 0.34 -- -0.0748 -- -0.128 3.74 -- -- -- --
188.83 0.643 3.21 -0.164 0.34 -- -- -- -0.128 3.7 -- -- -- --
181.95 0.628 3.21 -0.245 -- -0.656 -- -- -0.113 -- 1.136 15 -- --
182.1 0.629 3.21 -- 0.17 -0.537 -- -- -0.0923 3 1.128 15 -- --
195.21 0.653 3.21 -0.15 -- -- -- -- -0.119 -- -- -- -- --
189.54 0.644 3.21 -- 0.336 -- -- -- -0.109 3.7 -- -- -- --
183.5 0.631 3.21 -- -- -0.627 -- -- -0.0864 -- 1.129 15 -- --
195.81 0.653 3.21 -- -- -- -- -- -0.102 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 175.29 wind 1.0 270 < th dose independent rect. 14 1
2 175.70 wind 1.0 270 < th dose dependent rect. 14 1
3 175.92 radiation 40.0 270 > th dose independent rect. 15 1
20 175.92 radiation 40.0 270 > th dose dependent rect. 15 1
37 176.44 humidity 50.0 1440 < th dose independent rect. 16 1
38 176.52 humidity 50.0 1440 < th dose dependent rect. 16 1
40 177.00 temperature 25.0 10 < th dose independent rect. 2 4
41 177.32 temperature 30.0 720 > th dose dependent rect. 18 1
55 177.33 humidity 50.0 1440 > th dose independent rect. 16 1
56 177.60 temperature 25.0 720 > th dose dependent rect. 20 4
74 177.95 humidity 90.0 90 > th dose dependent rect. 3 2
75 177.97 wind 1.0 10 < th dose independent rect. 2 4
77 178.02 temperature 30.0 720 < th dose independent rect. 18 9
82 178.27 temperature 25.0 720 > th dose dependent rect. 22 1
85 178.36 wind 1.0 10 < th dose independent rect. 2 7
87 178.40 wind 1.0 90 < th dose independent rect. 4 1
93 178.47 wind 1.0 10 > th dose independent sin 5 NA
98 178.63 wind 1.0 10 > th dose independent rect. 18 23
100 178.66 temperature 25.0 10 > th dose independent rect. 17 1
106 178.73 wind 3.0 10 < th dose dependent rect. 2 4
110 178.87 atmosphere 1015.0 1440 < th dose independent rect. 3 3
112 178.91 humidity 90.0 90 > th dose independent rect. 2 3
113 178.91 humidity 70.0 720 > th dose independent rect. 18 9
116 178.96 wind 1.0 90 < th dose dependent rect. 4 1
117 178.98 humidity 90.0 10 > th dose independent rect. 2 4
118 179.01 radiation 20.0 14400 < th dose independent rect. 3 3
127 179.15 humidity 90.0 10 > th dose independent rect. 2 10
138 179.34 temperature 25.0 720 < th dose independent rect. 23 1
139 179.39 wind 1.0 10 > th dose independent rect. 21 14
148 179.47 wind 3.0 90 < th dose dependent rect. 1 4
161 179.49 temperature 20.0 30 > th dose independent rect. 2 16
165 179.54 temperature 25.0 720 < th dose independent rect. 21 3
182 179.65 atmosphere 1015.0 1440 < th dose independent rect. 3 1
184 179.65 wind 1.0 10 < th dose independent rect. 2 16
192 179.70 wind 1.0 10 < th dose independent rect. 4 2
193 179.70 wind 1.0 10 < th dose independent rect. 2 14
204 179.76 humidity 50.0 43200 > th dose independent rect. 3 1
207 179.84 wind 3.0 10 < th dose dependent rect. 24 6
208 179.85 wind 1.0 10 > th dose independent rect. 21 23
209 179.86 humidity 90.0 10 > th dose independent rect. 2 20
210 179.86 wind 3.0 10 < th dose dependent rect. 2 6
222 179.96 humidity 90.0 10 > th dose independent rect. 2 18
225 179.98 temperature 15.0 1440 > th dose independent rect. 3 1
227 180.00 temperature 20.0 90 > th dose independent rect. 3 2
228 180.00 temperature 25.0 10 < th dose independent rect. 2 15
229 180.00 temperature 25.0 30 < th dose dependent rect. 4 1
230 180.01 humidity 70.0 720 > th dose independent rect. 18 12
242 180.07 radiation 1.0 720 < th dose dependent rect. 18 9
244 180.10 humidity 90.0 10 > th dose dependent rect. 2 4
248 180.14 radiation 1.0 30 < th dose independent rect. 4 14
249 180.14 temperature 20.0 90 > th dose dependent rect. 3 2
251 180.16 wind 3.0 270 < th dose independent rect. 24 3
260 180.22 humidity 70.0 720 < th dose independent rect. 19 12
266 180.29 humidity 70.0 720 > th dose independent rect. 19 1
268 180.33 wind 3.0 10 > th dose independent rect. 17 1
271 180.38 humidity 70.0 720 < th dose independent rect. 19 1
286 180.44 temperature 25.0 10 < th dose independent rect. 2 10
289 180.44 temperature 15.0 270 > th dose independent rect. 3 21
299 180.47 temperature 15.0 90 > th dose independent rect. 5 21
302 180.50 temperature 30.0 720 < th dose independent rect. 18 1
308 180.56 humidity 90.0 10 > th dose dependent rect. 2 10
311 180.57 humidity 70.0 720 < th dose dependent rect. 19 12
315 180.60 atmosphere 1015.0 1440 < th dose independent rect. 1 5
325 180.63 wind 9.0 1440 < th dose independent rect. 3 3
326 180.63 temperature 10.0 1440 > th dose independent rect. 3 3
329 180.63 temperature 30.0 1440 < th dose independent rect. 3 3
333 180.63 humidity 50.0 1440 > th dose independent rect. 3 3
342 180.63 atmosphere 995.0 1440 > th dose independent rect. 3 3
353 180.63 radiation 20.0 14400 < th dose independent rect. 1 5
354 180.63 temperature 10.0 1440 > th dose independent rect. 6 21
357 180.63 humidity 70.0 720 < th dose dependent rect. 19 1
374 180.69 wind 3.0 270 < th dose dependent rect. 1 1
375 180.69 humidity 80.0 10 > th dose dependent rect. 2 19
385 180.75 temperature 25.0 10 < th dose independent rect. 4 2
394 180.78 radiation 1.0 720 < th dose independent rect. 18 9
403 180.79 wind 3.0 10 < th dose dependent rect. 24 8
442 180.96 wind 1.0 10 < th dose independent sin 4 NA
470 181.09 atmosphere 1005.0 270 > th dose independent rect. 1 2
475 181.10 radiation 30.0 43200 < th dose independent rect. 17 13
480 181.13 atmosphere 1005.0 10 > th dose independent rect. 2 4
484 181.14 radiation 1.0 30 < th dose dependent rect. 4 14
496 181.19 radiation 20.0 4320 < th dose independent rect. 5 1
499 181.19 temperature 30.0 720 < th dose independent rect. 18 15
528 181.29 wind 1.0 10 > th dose independent rect. 4 22
540 181.33 wind 5.0 270 < th dose independent rect. 13 15
542 181.33 temperature 20.0 10 < th dose dependent rect. 3 20
543 181.34 temperature 25.0 720 > th dose independent rect. 17 7
553 181.37 humidity 90.0 30 < th dose independent rect. 17 1
559 181.39 atmosphere 1000.0 10 > th dose dependent rect. 2 4
584 181.42 wind 1.0 10 > th dose independent rect. 1 23
589 181.43 temperature 25.0 270 > th dose independent rect. 23 1
592 181.44 wind 9.0 4320 < th dose independent rect. 3 1
593 181.44 wind 5.0 720 < th dose independent rect. 17 1
602 181.47 wind 1.0 10 > th dose independent no NA NA
603 181.47 temperature 30.0 30 < th dose dependent rect. 2 14
627 181.55 wind 1.0 10 > th dose independent rect. 18 17
638 181.58 temperature 20.0 90 < th dose dependent rect. 2 9
641 181.59 radiation 1.0 30 < th dose independent rect. 2 16
644 181.60 atmosphere 1005.0 30 > th dose independent rect. 4 1
666 181.64 radiation 1.0 4320 < th dose dependent rect. 3 1
685 181.66 humidity 50.0 14400 > th dose independent rect. 19 8
693 181.67 temperature 30.0 1440 < th dose independent rect. 3 1
697 181.67 humidity 50.0 1440 > th dose independent rect. 3 1
706 181.67 atmosphere 995.0 1440 > th dose independent rect. 3 1
707 181.67 radiation 1.0 1440 < th dose independent rect. 3 1
730 181.67 temperature 10.0 1440 > th dose independent rect. 4 23
755 181.69 wind 1.0 10 < th dose independent rect. 4 14
781 181.74 wind 1.0 10 > th dose independent rect. 21 20
788 181.75 temperature 25.0 270 > th dose independent rect. 22 3
789 181.75 wind 1.0 10 < th dose independent rect. 4 12
796 181.76 atmosphere 1010.0 30 < th dose dependent rect. 4 1
803 181.78 precipitation 0.1 720 > th dose independent rect. 7 6
806 181.78 precipitation 0.1 720 > th dose dependent rect. 7 6
810 181.79 radiation 1.0 90 > th dose independent rect. 16 1
842 181.83 atmosphere 995.0 270 > th dose dependent rect. 24 3
851 181.85 humidity 80.0 10 > th dose independent rect. 16 2
873 181.86 humidity 80.0 10 > th dose dependent rect. 24 23
895 181.89 temperature 30.0 720 > th dose independent rect. 18 1
914 181.90 wind 1.0 270 > th dose independent rect. 2 1
922 181.92 humidity 70.0 720 > th dose independent rect. 18 15
937 181.94 precipitation 0.1 30 < th dose independent rect. 4 1
941 181.94 precipitation 0.1 30 < th dose dependent rect. 4 1
962 181.97 wind 9.0 10 < th dose dependent rect. 2 16
963 181.98 wind 9.0 30 < th dose independent rect. 4 1
964 181.98 temperature 10.0 30 > th dose independent rect. 4 1
967 181.98 humidity 50.0 30 > th dose independent rect. 4 1
971 181.98 atmosphere 1010.0 30 < th dose independent rect. 4 1
973 181.98 radiation 10.0 14400 > th dose independent rect. 5 1
974 181.98 radiation 1.0 30 < th dose independent rect. 4 1
997 181.98 temperature 10.0 30 > th dose independent rect. 5 23
998 181.98 radiation 30.0 30 < th dose dependent rect. 4 1