Os08g0472600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Alpha1,3-fucosyltransferase (Fragment).
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Os08g0472600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Alpha1,3-fucosyltransferase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.26 | 0.258 | 10.3 | 0.618 | 0.443 | 0.515 | 0.18 | -1.13 | 0.409 | 23.8 | 7.278 | 1452 | -- | -- |
| 32.33 | 0.265 | 10.3 | 0.556 | 0.423 | 0.573 | 0.125 | -- | 0.372 | 23.8 | 5.435 | 1468 | -- | -- |
| 30.36 | 0.257 | 10.3 | 0.615 | 0.448 | 0.512 | -- | -1.1 | 0.408 | 23.9 | 7.071 | 1445 | -- | -- |
| 32.25 | 0.264 | 10.3 | 0.484 | 0.451 | 0.544 | -- | -- | 0.376 | 23.9 | 5.937 | 1452 | -- | -- |
| 35.5 | 0.277 | 10.3 | 0.509 | -- | 0.726 | -- | -0.856 | 0.342 | -- | 6.056 | 1653 | -- | -- |
| 37.62 | 0.288 | 10.3 | 0.436 | 0.476 | -- | 0.0246 | -- | 0.277 | 23.8 | -- | -- | -- | -- |
| 37.62 | 0.287 | 10.3 | 0.435 | 0.476 | -- | -- | -- | 0.277 | 23.8 | -- | -- | -- | -- |
| 35.81 | 0.279 | 10.3 | 0.533 | -- | 0.945 | -- | -- | 0.399 | -- | 4.635 | 1631 | -- | -- |
| 37.79 | 0.286 | 10.3 | -- | 0.448 | 0.512 | -- | -- | 0.341 | 23.8 | 9.99 | 1473 | -- | -- |
| 51.86 | 0.336 | 10.3 | 0.449 | -- | -- | -- | -- | 0.283 | -- | -- | -- | -- | -- |
| 42.61 | 0.305 | 10.3 | -- | 0.481 | -- | -- | -- | 0.228 | 23.9 | -- | -- | -- | -- |
| 42.3 | 0.303 | 10.3 | -- | -- | 0.799 | -- | -- | 0.339 | -- | 8.277 | 1646 | -- | -- |
| 57.18 | 0.353 | 10.3 | -- | -- | -- | -- | -- | 0.233 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.91 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 2 | 27.92 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 3 | 27.92 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 11 | 28.49 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 12 | 28.49 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 13 | 28.50 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 14 | 28.50 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 32 | 28.63 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 8 | 10 |
| 50 | 28.68 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 8 | 20 |
| 51 | 28.69 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 77 | 28.98 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 79 | 29.02 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 6 |
| 103 | 29.08 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 16 |
| 132 | 29.27 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 188 | 29.67 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 192 | 29.72 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 276 | 30.19 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 288 | 30.22 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 290 | 30.22 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 298 | 30.24 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 324 | 30.30 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 386 | 30.46 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 394 | 30.50 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 397 | 30.51 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 410 | 30.53 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 429 | 30.57 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 501 | 30.72 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 3 | 15 |
| 528 | 30.73 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 21 | 21 |
| 534 | 30.74 | radiation | 10.0 | 1440 | < th | dose dependent | no | NA | NA |
| 574 | 30.77 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 586 | 30.78 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 590 | 30.80 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 8 | 9 |
| 605 | 30.81 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 608 | 30.82 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 610 | 30.82 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 612 | 30.82 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 665 | 30.82 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 669 | 30.82 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 736 | 30.85 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 767 | 30.90 | radiation | 10.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 810 | 30.96 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 6 |
| 824 | 30.98 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 16 |
| 835 | 30.99 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 15 |
| 978 | 31.05 | radiation | 10.0 | 1440 | > th | dose independent | no | NA | NA |