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Os08g0463900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0199) R2 : 0.783
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.98 (0.0511) R2dC : 0.714 R2C : 0.707
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.468 (0.042) R2dN8 : 0.0763 R2N8 : 0.0694
σ : 0.376
deviance : 64.65
__
_____
C
peak time of C : 16.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
54.17 0.346 11.8 -0.243 1.72 -0.511 0.242 0.668 -0.533 16.9 15.32 79 -- --
56.02 0.349 11.8 -0.265 1.72 -0.5 -0.0754 -- -0.53 16.8 15.4 87 -- --
54.31 0.343 11.8 -0.246 1.73 -0.501 -- 0.625 -0.532 16.9 15.32 79 -- --
55.99 0.348 11.8 -0.272 1.71 -0.505 -- -- -0.535 16.9 14.07 86 -- --
68.54 0.386 11.8 -0.29 -- -1.97 -- 0.255 -0.584 -- 1.702 516 -- --
63.31 0.373 11.8 -0.215 1.97 -- -0.179 -- -0.491 16.1 -- -- -- --
63.4 0.373 11.8 -0.217 1.97 -- -- -- -0.492 16.1 -- -- -- --
68.66 0.386 11.8 -0.308 -- -1.95 -- -- -0.594 -- 1.7 516 -- --
57.93 0.354 11.8 -- 1.72 -0.485 -- -- -0.514 16.9 14.19 86 -- --
274.72 0.774 11.8 -0.297 -- -- -- -- -0.544 -- -- -- -- --
64.65 0.376 11.8 -- 1.98 -- -- -- -0.468 16.1 -- -- -- --
71.22 0.393 11.8 -- -- -1.96 -- -- -0.568 -- 1.7 516 -- --
277.05 0.777 11.8 -- -- -- -- -- -0.511 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 43.95 temperature 20.0 270 > th dose independent rect. 3 3
5 45.17 temperature 15.0 270 > th dose dependent rect. 3 3
14 46.23 radiation 10.0 90 < th dose independent rect. 4 19
15 46.27 radiation 20.0 90 < th dose dependent rect. 4 19
17 46.57 temperature 20.0 270 > th dose independent rect. 2 19
19 46.65 radiation 30.0 270 < th dose dependent rect. 17 14
20 46.66 radiation 10.0 270 < th dose independent rect. 17 14
22 46.84 radiation 10.0 270 < th dose independent rect. 3 3
23 46.86 radiation 10.0 270 < th dose dependent rect. 3 5
26 46.88 humidity 60.0 270 > th dose dependent rect. 3 3
40 47.12 humidity 50.0 270 > th dose dependent rect. 17 14
43 47.14 precipitation 0.1 270 < th dose independent rect. 6 21
44 47.14 precipitation 0.1 270 < th dose dependent rect. 6 21
46 47.16 wind 9.0 270 < th dose independent rect. 6 21
57 47.37 temperature 15.0 270 > th dose independent rect. 1 22
60 47.40 atmosphere 995.0 270 > th dose independent rect. 17 14
64 47.44 atmosphere 1010.0 270 < th dose independent rect. 3 3
67 47.44 radiation 10.0 270 < th dose dependent rect. 3 10
75 47.55 wind 9.0 270 < th dose independent rect. 3 3
76 47.55 temperature 10.0 270 > th dose independent rect. 3 3
78 47.55 temperature 30.0 270 < th dose independent rect. 3 3
79 47.55 humidity 50.0 270 > th dose independent rect. 3 3
82 47.55 atmosphere 995.0 270 > th dose independent rect. 3 3
87 47.55 temperature 10.0 270 > th dose independent rect. 6 21
89 47.57 humidity 50.0 10 > th dose dependent rect. 5 18
90 47.58 wind 1.0 270 > th dose independent rect. 23 2
96 47.63 wind 9.0 270 < th dose independent rect. 7 10
104 47.71 precipitation 0.1 270 < th dose independent rect. 7 10
105 47.71 precipitation 0.1 270 < th dose dependent rect. 7 10
114 47.78 humidity 50.0 270 > th dose independent rect. 17 14
121 47.85 temperature 10.0 270 > th dose independent rect. 7 10
122 47.85 atmosphere 1015.0 270 < th dose independent rect. 7 10
123 47.85 temperature 10.0 270 > th dose independent rect. 17 14
127 47.90 temperature 20.0 270 > th dose independent rect. 15 16
140 48.00 radiation 10.0 270 < th dose dependent rect. 1 21
150 48.06 precipitation 0.1 270 < th dose independent rect. 3 3
151 48.06 precipitation 0.1 270 < th dose dependent rect. 3 3
154 48.08 wind 5.0 90 < th dose independent rect. 23 5
163 48.14 radiation 40.0 10 < th dose dependent rect. 5 4
173 48.21 wind 9.0 270 < th dose independent rect. 17 14
204 48.41 humidity 50.0 10 > th dose dependent rect. 5 4
217 48.46 radiation 30.0 10 < th dose independent rect. 5 4
219 48.47 wind 1.0 90 > th dose independent rect. 23 5
221 48.48 wind 5.0 270 < th dose independent rect. 23 2
239 48.52 wind 9.0 270 < th dose dependent rect. 3 3
240 48.52 atmosphere 995.0 90 > th dose dependent rect. 23 5
244 48.54 humidity 70.0 10 > th dose independent rect. 5 4
254 48.54 humidity 80.0 90 > th dose independent rect. 4 7
272 48.62 temperature 10.0 10 > th dose dependent rect. 5 4
279 48.64 atmosphere 1015.0 90 < th dose independent rect. 4 19
284 48.69 precipitation 0.1 270 < th dose independent rect. 23 2
285 48.69 precipitation 0.1 270 < th dose dependent rect. 23 2
286 48.69 humidity 60.0 90 > th dose dependent rect. 4 7
287 48.70 precipitation 0.1 90 < th dose independent rect. 23 5
288 48.70 precipitation 0.1 90 < th dose dependent rect. 23 5
292 48.72 temperature 10.0 270 > th dose independent rect. 23 2
293 48.72 temperature 30.0 270 < th dose independent rect. 23 2
294 48.72 humidity 50.0 270 > th dose independent rect. 23 2
297 48.72 atmosphere 995.0 270 > th dose independent rect. 23 2
298 48.72 radiation 1.0 270 < th dose independent rect. 23 2
304 48.72 radiation 1.0 270 < th dose dependent rect. 23 2
311 48.73 wind 1.0 270 > th dose independent rect. 7 19
313 48.74 atmosphere 995.0 270 > th dose dependent rect. 23 2
318 48.77 radiation 40.0 90 < th dose independent rect. 4 19
338 48.84 radiation 40.0 90 < th dose dependent rect. 4 7
359 48.92 radiation 10.0 270 < th dose independent rect. 1 21
365 48.94 temperature 10.0 90 > th dose independent rect. 23 5
366 48.94 temperature 30.0 90 < th dose independent rect. 23 5
367 48.94 humidity 50.0 90 > th dose independent rect. 23 5
370 48.94 atmosphere 995.0 90 > th dose independent rect. 23 5
371 48.94 radiation 1.0 90 < th dose independent rect. 23 5
376 48.94 precipitation 0.1 270 < th dose independent rect. 2 5
380 48.94 radiation 1.0 90 < th dose dependent rect. 23 5
385 48.94 precipitation 0.1 270 < th dose dependent rect. 2 5
396 48.99 wind 5.0 270 < th dose independent rect. 21 5
428 49.08 wind 9.0 90 < th dose independent rect. 9 19
486 49.27 temperature 15.0 270 > th dose independent rect. 11 11
487 49.27 temperature 10.0 90 > th dose independent rect. 9 19
492 49.28 wind 1.0 270 > th dose independent rect. 7 10
495 49.29 precipitation 0.1 90 < th dose independent rect. 9 19
496 49.29 wind 9.0 10 < th dose independent rect. 9 20
499 49.29 precipitation 0.1 90 < th dose dependent rect. 9 19
501 49.30 radiation 20.0 4320 < th dose dependent rect. 24 5
507 49.32 atmosphere 995.0 90 > th dose independent rect. 4 19
513 49.33 radiation 1.0 10 < th dose dependent rect. 23 6
543 49.38 precipitation 0.1 10 < th dose independent rect. 23 6
545 49.38 precipitation 0.1 10 < th dose dependent rect. 23 6
547 49.39 wind 9.0 90 < th dose independent rect. 4 19
553 49.40 radiation 40.0 270 < th dose dependent rect. 11 20
555 49.41 temperature 10.0 10 > th dose independent rect. 23 6
556 49.41 temperature 30.0 10 < th dose independent rect. 23 6
557 49.41 humidity 50.0 10 > th dose independent rect. 23 6
560 49.41 atmosphere 995.0 10 > th dose independent rect. 23 6
561 49.41 radiation 1.0 10 < th dose independent rect. 23 6
566 49.41 temperature 10.0 10 > th dose independent rect. 5 18
568 49.41 atmosphere 1015.0 10 < th dose independent rect. 5 18
569 49.41 precipitation 0.1 10 < th dose independent rect. 5 18
573 49.41 precipitation 0.1 10 < th dose dependent rect. 5 18
598 49.49 wind 9.0 10 < th dose dependent rect. 5 4
599 49.50 wind 7.0 10 < th dose independent rect. 5 4
601 49.50 temperature 10.0 10 > th dose independent rect. 5 4
603 49.50 temperature 30.0 10 < th dose independent rect. 5 4
604 49.50 humidity 50.0 10 > th dose independent rect. 5 4
606 49.50 atmosphere 995.0 10 > th dose independent rect. 5 4
607 49.50 atmosphere 1015.0 10 < th dose independent rect. 5 4
609 49.50 temperature 10.0 10 > th dose independent rect. 9 20
619 49.51 precipitation 0.1 270 < th dose independent rect. 22 13
622 49.51 precipitation 0.1 270 < th dose dependent rect. 22 13
636 49.54 atmosphere 995.0 10 > th dose independent rect. 5 18
639 49.54 humidity 60.0 90 > th dose dependent rect. 4 11
642 49.55 atmosphere 995.0 270 > th dose independent rect. 2 19
643 49.55 atmosphere 1015.0 270 < th dose independent rect. 2 19
683 49.62 precipitation 0.1 10 < th dose independent rect. 5 4
705 49.62 precipitation 0.1 10 < th dose dependent rect. 5 4
719 49.64 humidity 70.0 30 > th dose independent rect. 5 18
720 49.64 precipitation 0.1 10 < th dose independent rect. 9 20
724 49.64 precipitation 0.1 10 < th dose dependent rect. 9 20
727 49.65 wind 9.0 90 < th dose dependent rect. 23 5
744 49.69 atmosphere 1015.0 270 < th dose independent rect. 1 21
747 49.69 humidity 50.0 270 > th dose dependent rect. 2 18
755 49.71 radiation 40.0 90 < th dose independent rect. 12 11
765 49.73 atmosphere 995.0 270 > th dose independent rect. 1 21
774 49.75 precipitation 0.1 90 < th dose independent rect. 4 19
776 49.75 precipitation 0.1 90 < th dose dependent rect. 4 19
778 49.76 precipitation 0.1 270 < th dose independent rect. 21 5
783 49.76 precipitation 0.1 270 < th dose dependent rect. 21 5
788 49.77 atmosphere 995.0 10 > th dose dependent rect. 23 6
789 49.78 temperature 10.0 270 > th dose independent rect. 21 5
790 49.78 temperature 30.0 270 < th dose independent rect. 21 5
791 49.78 humidity 50.0 270 > th dose independent rect. 21 5
794 49.78 atmosphere 995.0 270 > th dose independent rect. 21 5
795 49.78 radiation 1.0 270 < th dose independent rect. 21 5
803 49.78 radiation 1.0 270 < th dose dependent rect. 21 5
844 49.87 wind 1.0 90 > th dose independent rect. 23 14
847 49.87 humidity 50.0 10 > th dose dependent rect. 18 15
857 49.88 radiation 1.0 270 > th dose independent rect. 7 10
862 49.88 temperature 10.0 270 > th dose dependent rect. 17 14
871 49.90 humidity 80.0 90 > th dose independent rect. 4 9
896 49.94 wind 9.0 10 < th dose independent rect. 5 18
899 49.94 radiation 40.0 90 < th dose dependent rect. 4 11
974 50.02 wind 9.0 270 < th dose dependent rect. 22 3
995 50.05 radiation 20.0 90 < th dose independent rect. 4 11
1000 50.06 wind 9.0 270 < th dose independent rect. 22 13