Os08g0463500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, C2H2-type domain containing protein.
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Os08g0463500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, C2H2-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.1 | 0.364 | 8.43 | -0.0486 | 0.742 | -1.2 | -0.966 | -2.73 | 0.215 | 10.1 | 23.65 | 4514 | -- | -- |
| 63.9 | 0.372 | 8.51 | -0.431 | 0.788 | -0.775 | -0.941 | -- | 0.157 | 10.1 | 33.9 | 3550 | -- | -- |
| 63.55 | 0.371 | 8.42 | -0.122 | 0.783 | -1.35 | -- | -3.06 | 0.209 | 9.87 | 23.19 | 5015 | -- | -- |
| 67.32 | 0.382 | 8.51 | -0.471 | 0.797 | -0.777 | -- | -- | 0.153 | 9.91 | 33.8 | 3554 | -- | -- |
| 97.41 | 0.46 | 8.44 | -0.11 | -- | -1.29 | -- | -2.93 | 0.217 | -- | 23.13 | 4504 | -- | -- |
| 74.19 | 0.404 | 8.48 | -0.109 | 0.739 | -- | -0.958 | -- | 0.306 | 9.99 | -- | -- | -- | -- |
| 77.69 | 0.413 | 8.48 | -0.148 | 0.748 | -- | -- | -- | 0.303 | 9.79 | -- | -- | -- | -- |
| 99.96 | 0.468 | 8.53 | -0.315 | -- | -0.819 | -- | -- | 0.184 | -- | 33.1 | 5853 | -- | -- |
| 71.8 | 0.395 | 8.5 | -- | 0.762 | -0.528 | -- | -- | 0.238 | 9.92 | 39.7 | 3119 | -- | -- |
| 111.05 | 0.492 | 8.5 | -0.155 | -- | -- | -- | -- | 0.303 | -- | -- | -- | -- | -- |
| 78.27 | 0.414 | 8.48 | -- | 0.748 | -- | -- | -- | 0.319 | 9.8 | -- | -- | -- | -- |
| 102.43 | 0.473 | 8.52 | -- | -- | -0.726 | -- | -- | 0.231 | -- | 33.1 | 5853 | -- | -- |
| 111.69 | 0.493 | 8.5 | -- | -- | -- | -- | -- | 0.32 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.56 | humidity | 60 | 43200 | < th | dose dependent | rect. | 24 | 10 |
| 7 | 55.68 | temperature | 15 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 10 | 55.96 | humidity | 60 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 11 | 55.97 | humidity | 70 | 43200 | > th | dose independent | rect. | 22 | 11 |
| 19 | 56.10 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 39 | 56.25 | temperature | 15 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 42 | 56.26 | humidity | 50 | 43200 | < th | dose dependent | sin | 9 | NA |
| 47 | 56.31 | temperature | 15 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 57 | 56.36 | temperature | 20 | 14400 | < th | dose dependent | rect. | 24 | 7 |
| 88 | 56.50 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 93 | 56.51 | humidity | 70 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 107 | 56.55 | temperature | 20 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 119 | 56.59 | temperature | 15 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 144 | 56.70 | temperature | 15 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 150 | 56.74 | temperature | 15 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 158 | 56.78 | temperature | 15 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 182 | 56.87 | temperature | 20 | 14400 | < th | dose dependent | rect. | 24 | 15 |
| 217 | 56.95 | humidity | 50 | 43200 | > th | dose independent | sin | 9 | NA |
| 236 | 57.01 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 6 |
| 241 | 57.03 | humidity | 50 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 258 | 57.05 | humidity | 50 | 43200 | < th | dose independent | rect. | 19 | 17 |
| 260 | 57.05 | temperature | 20 | 14400 | < th | dose dependent | sin | 7 | NA |
| 267 | 57.06 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 270 | 57.07 | radiation | 10 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 290 | 57.10 | humidity | 50 | 43200 | < th | dose independent | rect. | 3 | 9 |
| 294 | 57.10 | humidity | 50 | 43200 | > th | dose independent | rect. | 23 | 13 |
| 310 | 57.13 | humidity | 50 | 43200 | < th | dose independent | sin | 9 | NA |
| 313 | 57.13 | humidity | 50 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 325 | 57.14 | temperature | 20 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 334 | 57.16 | temperature | 20 | 43200 | < th | dose dependent | rect. | 5 | 12 |
| 339 | 57.16 | humidity | 50 | 43200 | < th | dose dependent | rect. | 16 | 22 |
| 344 | 57.18 | radiation | 10 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 366 | 57.23 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 374 | 57.25 | temperature | 20 | 43200 | < th | dose dependent | sin | 1 | NA |
| 444 | 57.37 | humidity | 50 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 532 | 57.47 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 587 | 57.52 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 6 |
| 609 | 57.53 | temperature | 15 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 610 | 57.53 | temperature | 20 | 43200 | < th | dose dependent | no | NA | NA |
| 649 | 57.55 | temperature | 20 | 43200 | < th | dose dependent | rect. | 18 | 23 |
| 688 | 57.58 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 747 | 57.60 | humidity | 50 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 832 | 57.66 | temperature | 20 | 43200 | < th | dose dependent | sin | 17 | NA |
| 864 | 57.68 | humidity | 50 | 43200 | < th | dose independent | rect. | 17 | 20 |
| 894 | 57.70 | humidity | 50 | 43200 | < th | dose dependent | no | NA | NA |
| 905 | 57.70 | humidity | 50 | 43200 | < th | dose dependent | rect. | 3 | 18 |
| 930 | 57.71 | temperature | 15 | 14400 | > th | dose independent | rect. | 9 | 18 |
| 944 | 57.71 | humidity | 50 | 43200 | < th | dose dependent | rect. | 4 | 16 |