Os08g0454400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0454400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 145.85 | 0.567 | 7.02 | -1.52 | 1.89 | -3.28 | -0.602 | 0.502 | -0.89 | 3.75 | 24.68 | 1463 | -- | -- |
| 145.9 | 0.563 | 7.02 | -1.45 | 1.9 | -3.4 | -0.61 | -- | -0.877 | 3.7 | 24.28 | 1495 | -- | -- |
| 146.84 | 0.564 | 7.01 | -1.5 | 1.89 | -3.33 | -- | 0.39 | -0.874 | 3.77 | 24.32 | 1467 | -- | -- |
| 146.96 | 0.565 | 7 | -1.44 | 1.89 | -3.4 | -- | -- | -0.852 | 3.77 | 24.2 | 1474 | -- | -- |
| 309.78 | 0.82 | 7.07 | -1.84 | -- | -3.37 | -- | 2.38 | -0.92 | -- | 30.79 | 1182 | -- | -- |
| 291.2 | 0.8 | 6.85 | -0.432 | 1.98 | -- | -0.729 | -- | -0.189 | 3.75 | -- | -- | -- | -- |
| 292.78 | 0.801 | 6.85 | -0.421 | 1.98 | -- | -- | -- | -0.185 | 3.77 | -- | -- | -- | -- |
| 313.12 | 0.824 | 7.04 | -1.42 | -- | -3.59 | -- | -- | -0.944 | -- | 28 | 1174 | -- | -- |
| 192.39 | 0.646 | 6.94 | -- | 1.84 | -2.61 | -- | -- | -0.593 | 3.84 | 24.78 | 1386 | -- | -- |
| 509.48 | 1.05 | 6.86 | -0.339 | -- | -- | -- | -- | -0.132 | -- | -- | -- | -- | -- |
| 297.45 | 0.807 | 6.84 | -- | 1.97 | -- | -- | -- | -0.138 | 3.77 | -- | -- | -- | -- |
| 359.22 | 0.883 | 6.97 | -- | -- | -2.92 | -- | -- | -0.649 | -- | 28.86 | 1167 | -- | -- |
| 512.5 | 1.06 | 6.85 | -- | -- | -- | -- | -- | -0.0949 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 143.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 15 |
| 13 | 143.69 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 88 | 145.01 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 4 |
| 91 | 145.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 12 |
| 110 | 145.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 4 |
| 113 | 145.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 9 |
| 117 | 145.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 191 | 145.71 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 7 |
| 213 | 145.80 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 264 | 146.09 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 295 | 146.32 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 320 | 146.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 426 | 147.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 975 | 151.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |