Os08g0453800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0453800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.66 | 0.331 | 7.43 | -0.617 | 0.565 | 0.444 | -0.391 | 0.696 | 0.0661 | 1.52 | 69.32 | 1255 | -- | -- |
| 50.48 | 0.331 | 7.42 | -0.538 | 0.57 | 0.485 | -0.464 | -- | 0.0844 | 1.35 | 70 | 1204 | -- | -- |
| 50.12 | 0.33 | 7.43 | -0.625 | 0.576 | 0.455 | -- | 0.82 | 0.0643 | 1.28 | 70 | 1211 | -- | -- |
| 51.36 | 0.334 | 7.42 | -0.502 | 0.595 | 0.513 | -- | -- | 0.0942 | 1.2 | 69.86 | 1189 | -- | -- |
| 65.2 | 0.376 | 7.4 | -0.705 | -- | 0.444 | -- | 0.621 | 0.118 | -- | 71.01 | 3147 | -- | -- |
| 59.1 | 0.36 | 7.42 | -0.633 | 0.462 | -- | -0.62 | -- | 0.0536 | 1.7 | -- | -- | -- | -- |
| 60.55 | 0.364 | 7.42 | -0.613 | 0.46 | -- | -- | -- | 0.0577 | 1.41 | -- | -- | -- | -- |
| 63.75 | 0.372 | 7.41 | -0.496 | -- | 0.594 | -- | -- | 0.0698 | -- | 68 | 1730 | -- | -- |
| 57.81 | 0.354 | 7.4 | -- | 0.612 | 0.592 | -- | -- | 0.152 | 1.13 | 69 | 1180 | -- | -- |
| 73.58 | 0.401 | 7.42 | -0.595 | -- | -- | -- | -- | 0.0675 | -- | -- | -- | -- | -- |
| 70.45 | 0.393 | 7.41 | -- | 0.45 | -- | -- | -- | 0.126 | 1.36 | -- | -- | -- | -- |
| 68.06 | 0.384 | 7.38 | -- | -- | 0.709 | -- | -- | 0.208 | -- | 71.23 | 1684 | -- | -- |
| 82.91 | 0.425 | 7.4 | -- | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 2 | 46.80 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 3 | 46.88 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 4 | 46.88 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 5 | 47.50 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 6 | 47.50 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 7 | 47.59 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 17 | 47.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 19 | 47.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 12 |
| 22 | 47.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 12 |
| 25 | 47.83 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 12 |
| 26 | 47.84 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 27 | 47.84 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 28 | 47.84 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 29 | 47.85 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 31 | 47.86 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 33 | 47.87 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 34 | 47.87 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 40 | 47.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 50 | 48.14 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 51 | 48.16 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 52 | 48.19 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 4 |
| 56 | 48.23 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 72 | 48.33 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 73 | 48.33 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 74 | 48.33 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 77 | 48.35 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 78 | 48.35 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 79 | 48.35 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 95 | 48.44 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 100 | 48.46 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 118 | 48.51 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 120 | 48.53 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 128 | 48.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 129 | 48.55 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 4 | 10 |
| 150 | 48.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 153 | 48.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 157 | 48.61 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 2 | NA |
| 162 | 48.61 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 2 | NA |
| 174 | 48.63 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 181 | 48.64 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 186 | 48.65 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 2 | NA |
| 194 | 48.65 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 203 | 48.68 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 215 | 48.72 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 221 | 48.74 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 253 | 48.80 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 8 |
| 264 | 48.83 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 285 | 48.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 288 | 48.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 17 |
| 295 | 48.89 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 303 | 48.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 17 |
| 310 | 48.91 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 9 |
| 312 | 48.92 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 332 | 48.95 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 335 | 48.96 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 339 | 48.96 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 349 | 48.99 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 19 |
| 350 | 48.99 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 353 | 48.99 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 19 |
| 368 | 49.01 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 19 |
| 387 | 49.04 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 416 | 49.09 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 457 | 49.15 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 458 | 49.16 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 468 | 49.16 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 11 |
| 492 | 49.20 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 2 |
| 522 | 49.26 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 539 | 49.29 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 543 | 49.29 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 548 | 49.30 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |
| 552 | 49.31 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 560 | 49.31 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 8 | 9 |
| 589 | 49.34 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 13 |
| 594 | 49.35 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 620 | 49.38 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 633 | 49.40 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 19 |
| 648 | 49.42 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 653 | 49.42 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 678 | 49.45 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 11 |
| 706 | 49.49 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 709 | 49.49 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 4 | NA |
| 713 | 49.49 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 10 |
| 715 | 49.50 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 718 | 49.50 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 21 |
| 765 | 49.55 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 6 |
| 781 | 49.56 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 10 |
| 788 | 49.56 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 10 |
| 797 | 49.57 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 19 |
| 811 | 49.58 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 21 |
| 830 | 49.59 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 861 | 49.61 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 926 | 49.67 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 10 |
| 932 | 49.68 | humidity | 70.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 950 | 49.69 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 973 | 49.71 | humidity | 80.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 975 | 49.71 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 12 |
| 986 | 49.71 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |