Os08g0453200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dormancyauxin associated family protein.
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Os08g0453200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dormancyauxin associated family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.91 | 0.361 | 12.8 | 0.636 | 0.245 | -1.45 | 0.0447 | 2.04 | 0.526 | 21.7 | 21.57 | 157 | -- | -- |
| 62.18 | 0.367 | 12.8 | 0.27 | 0.209 | -1.26 | 0.077 | -- | 0.407 | 22 | 21.72 | 152 | -- | -- |
| 58.85 | 0.357 | 12.8 | 0.617 | 0.262 | -1.44 | -- | 2.08 | 0.523 | 21.6 | 22.15 | 162 | -- | -- |
| 61.99 | 0.367 | 12.8 | 0.268 | 0.237 | -1.24 | -- | -- | 0.412 | 22.4 | 21.69 | 155 | -- | -- |
| 60.44 | 0.362 | 12.8 | 0.61 | -- | -1.49 | -- | 1.97 | 0.531 | -- | 21.34 | 39 | -- | -- |
| 89.29 | 0.443 | 12.9 | -0.0143 | 0.584 | -- | -0.126 | -- | 0.206 | 2.26 | -- | -- | -- | -- |
| 89.35 | 0.443 | 12.9 | -0.0108 | 0.584 | -- | -- | -- | 0.207 | 2.26 | -- | -- | -- | -- |
| 63.53 | 0.371 | 12.8 | 0.289 | -- | -1.39 | -- | -- | 0.44 | -- | 20.95 | 38 | -- | -- |
| 63.63 | 0.372 | 12.8 | -- | 0.255 | -1.18 | -- | -- | 0.372 | 22.7 | 22.18 | 161 | -- | -- |
| 109.61 | 0.489 | 12.9 | 0.0138 | -- | -- | -- | -- | 0.221 | -- | -- | -- | -- | -- |
| 89.35 | 0.442 | 12.9 | -- | 0.584 | -- | -- | -- | 0.208 | 2.26 | -- | -- | -- | -- |
| 65.6 | 0.377 | 12.8 | -- | -- | -1.33 | -- | -- | 0.401 | -- | 21.06 | 37 | -- | -- |
| 109.62 | 0.489 | 12.9 | -- | -- | -- | -- | -- | 0.22 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.56 | temperature | 20 | 10 | > th | dose dependent | sin | 18 | NA |
| 3 | 55.10 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 17 |
| 43 | 57.24 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 22 |
| 68 | 58.15 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 22 |
| 91 | 58.64 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 17 |
| 120 | 59.12 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 123 | 59.15 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 8 |
| 141 | 59.27 | temperature | 20 | 90 | > th | dose dependent | rect. | 22 | 23 |
| 156 | 59.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 17 |
| 171 | 59.47 | temperature | 25 | 1440 | > th | dose dependent | sin | 3 | NA |
| 195 | 59.61 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 19 |
| 232 | 59.95 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 238 | 59.97 | temperature | 30 | 10 | < th | dose dependent | sin | 19 | NA |
| 249 | 60.04 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 257 | 60.07 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 289 | 60.27 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 9 |
| 310 | 60.34 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 18 |
| 369 | 60.46 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 396 | 60.50 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 409 | 60.53 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 475 | 60.70 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 21 |
| 583 | 61.04 | temperature | 20 | 30 | > th | dose dependent | rect. | 2 | 23 |
| 596 | 61.09 | humidity | 50 | 10 | > th | dose dependent | sin | 18 | NA |
| 772 | 61.72 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 10 |
| 808 | 61.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 911 | 62.13 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 17 |
| 959 | 62.29 | radiation | 1 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 997 | 62.42 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |