Os08g0440100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Temperature stress-induced lipocalin.
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Os08g0440100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Temperature stress-induced lipocalin.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.96 | 0.351 | 12.2 | -0.481 | 1.54 | 0.671 | -0.16 | -1.83 | -0.142 | 5.44 | 22.7 | 1414 | -- | -- |
| 57.82 | 0.354 | 12.1 | 0.0676 | 1.53 | 0.555 | -0.211 | -- | -0.00076 | 5.44 | 20.8 | 1383 | -- | -- |
| 56.02 | 0.349 | 12.2 | -0.477 | 1.54 | 0.67 | -- | -1.81 | -0.142 | 5.45 | 22.6 | 1409 | -- | -- |
| 57.92 | 0.354 | 12.1 | 0.0628 | 1.53 | 0.56 | -- | -- | -0.000276 | 5.45 | 20.79 | 1383 | -- | -- |
| 176.09 | 0.618 | 12.2 | -0.445 | -- | 0.89 | -- | -1.84 | -0.116 | -- | 23.3 | 1295 | -- | -- |
| 68.14 | 0.387 | 12.1 | 0.265 | 1.57 | -- | -0.163 | -- | 0.129 | 5.36 | -- | -- | -- | -- |
| 68.2 | 0.387 | 12.1 | 0.265 | 1.57 | -- | -- | -- | 0.13 | 5.36 | -- | -- | -- | -- |
| 178.4 | 0.622 | 12.2 | 0.0181 | -- | 0.786 | -- | -- | -0.0359 | -- | 19.79 | 1283 | -- | -- |
| 58.02 | 0.355 | 12.1 | -- | 1.54 | 0.568 | -- | -- | -0.00441 | 5.44 | 20.73 | 1384 | -- | -- |
| 197.27 | 0.656 | 12.1 | 0.318 | -- | -- | -- | -- | 0.169 | -- | -- | -- | -- | -- |
| 70.05 | 0.392 | 12.1 | -- | 1.58 | -- | -- | -- | 0.1 | 5.35 | -- | -- | -- | -- |
| 178.1 | 0.622 | 12.2 | -- | -- | 0.771 | -- | -- | -0.0128 | -- | 21.33 | 1290 | -- | -- |
| 199.95 | 0.66 | 12.1 | -- | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.05 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 2 | 53.37 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 3 | 53.47 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 18 | 53.96 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 9 |
| 31 | 54.08 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 6 |
| 40 | 54.16 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 9 |
| 48 | 54.19 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 10 |
| 115 | 54.58 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 118 | 54.61 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 127 | 54.67 | wind | 5 | 43200 | > th | dose independent | sin | 19 | NA |
| 128 | 54.67 | wind | 5 | 43200 | < th | dose independent | sin | 19 | NA |
| 165 | 54.80 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 167 | 54.81 | wind | 5 | 14400 | > th | dose independent | rect. | 5 | 12 |
| 187 | 54.89 | wind | 5 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 190 | 54.90 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 223 | 55.00 | wind | 5 | 14400 | > th | dose independent | sin | 0 | NA |
| 238 | 55.01 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 246 | 55.04 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 271 | 55.12 | radiation | 40 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 277 | 55.13 | wind | 5 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 284 | 55.14 | wind | 7 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 296 | 55.17 | wind | 5 | 14400 | < th | dose independent | sin | 0 | NA |
| 300 | 55.17 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 317 | 55.21 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 319 | 55.22 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 335 | 55.24 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 356 | 55.29 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 378 | 55.32 | radiation | 30 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 387 | 55.33 | wind | 3 | 43200 | > th | dose dependent | sin | 19 | NA |
| 401 | 55.36 | radiation | 40 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 405 | 55.36 | wind | 5 | 14400 | < th | dose independent | rect. | 5 | 16 |
| 442 | 55.42 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 521 | 55.57 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 522 | 55.57 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 17 |
| 538 | 55.61 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 559 | 55.63 | wind | 5 | 14400 | > th | dose independent | rect. | 10 | 21 |
| 561 | 55.63 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 564 | 55.64 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 583 | 55.64 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 591 | 55.65 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 592 | 55.66 | radiation | 20 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 670 | 55.71 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 677 | 55.72 | wind | 5 | 14400 | < th | dose independent | rect. | 24 | 21 |
| 680 | 55.72 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 690 | 55.74 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 691 | 55.74 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 14 |
| 732 | 55.76 | wind | 5 | 14400 | > th | dose dependent | rect. | 5 | 16 |
| 765 | 55.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 785 | 55.81 | wind | 5 | 14400 | > th | dose independent | rect. | 20 | 22 |
| 810 | 55.84 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 822 | 55.85 | radiation | 20 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 923 | 55.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 8 |
| 944 | 55.90 | wind | 5 | 14400 | > th | dose dependent | rect. | 5 | 13 |
| 947 | 55.91 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 960 | 55.91 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 4 |
| 990 | 55.94 | wind | 5 | 14400 | < th | dose independent | rect. | 20 | 22 |