Os08g0438400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ZF-HD homeobox protein Cys/His-rich dimerisation region domain containing protein.
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Os08g0438400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ZF-HD homeobox protein Cys/His-rich dimerisation region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.52 | 0.437 | 10.5 | 0.328 | 1.61 | -0.805 | -0.0593 | -1.04 | -0.168 | 19.6 | 75.98 | 1314 | -- | -- |
| 87.82 | 0.436 | 10.5 | 0.445 | 1.61 | -0.855 | -0.0657 | -- | -0.137 | 19.6 | 75.85 | 1313 | -- | -- |
| 86.49 | 0.433 | 10.5 | 0.328 | 1.62 | -0.806 | -- | -1.05 | -0.171 | 19.6 | 76 | 1303 | -- | -- |
| 87.83 | 0.436 | 10.5 | 0.446 | 1.61 | -0.858 | -- | -- | -0.137 | 19.6 | 75.84 | 1313 | -- | -- |
| 223.55 | 0.696 | 10.5 | 0.319 | -- | -1.09 | -- | -0.96 | -0.202 | -- | 78 | 1366 | -- | -- |
| 100.83 | 0.471 | 10.5 | 0.352 | 1.63 | -- | -0.00436 | -- | -0.211 | 19.4 | -- | -- | -- | -- |
| 100.83 | 0.47 | 10.5 | 0.352 | 1.63 | -- | -- | -- | -0.211 | 19.4 | -- | -- | -- | -- |
| 224.53 | 0.698 | 10.5 | 0.407 | -- | -1.16 | -- | -- | -0.179 | -- | 77.35 | 1370 | -- | -- |
| 93.04 | 0.449 | 10.5 | -- | 1.59 | -0.77 | -- | -- | -0.176 | 19.6 | 75.87 | 1313 | -- | -- |
| 242.19 | 0.727 | 10.5 | 0.325 | -- | -- | -- | -- | -0.238 | -- | -- | -- | -- | -- |
| 104.09 | 0.477 | 10.5 | -- | 1.63 | -- | -- | -- | -0.25 | 19.4 | -- | -- | -- | -- |
| 228.86 | 0.705 | 10.5 | -- | -- | -1.1 | -- | -- | -0.226 | -- | 77.01 | 1370 | -- | -- |
| 244.98 | 0.731 | 10.5 | -- | -- | -- | -- | -- | -0.274 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.62 | wind | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 2 | 78.08 | wind | 5.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 3 | 78.53 | wind | 5.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 5 | 78.72 | wind | 3.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 9 | 78.96 | wind | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 21 | 79.60 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 25 | 79.84 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 26 | 79.84 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 33 | 80.06 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 40 | 80.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 4 |
| 41 | 80.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 43 | 80.24 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 15 |
| 44 | 80.24 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 55 | 80.60 | radiation | 1.0 | 30 | < th | dose dependent | sin | 11 | NA |
| 58 | 80.62 | radiation | 1.0 | 30 | < th | dose independent | sin | 11 | NA |
| 59 | 80.63 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 68 | 80.79 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 78 | 80.97 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 79 | 80.97 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 80 | 80.97 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 85 | 81.06 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 87 | 81.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 91 | 81.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 9 |
| 93 | 81.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 102 | 81.31 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 110 | 81.42 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 115 | 81.47 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 124 | 81.52 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 132 | 81.55 | radiation | 1.0 | 30 | < th | dose independent | rect. | 21 | 17 |
| 138 | 81.67 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 143 | 81.71 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 145 | 81.72 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 148 | 81.72 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 151 | 81.72 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 152 | 81.72 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 153 | 81.72 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 156 | 81.72 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 165 | 81.77 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 190 | 81.87 | radiation | 1.0 | 30 | < th | dose independent | rect. | 21 | 15 |
| 194 | 81.89 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 201 | 81.93 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 203 | 81.94 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 206 | 81.94 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 209 | 81.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 210 | 81.94 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 212 | 81.94 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 217 | 81.94 | radiation | 1.0 | 30 | < th | dose independent | rect. | 21 | 11 |
| 222 | 81.94 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 224 | 81.94 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 226 | 81.95 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 241 | 82.01 | wind | 1.0 | 90 | > th | dose independent | rect. | 7 | 9 |
| 253 | 82.11 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 9 |
| 266 | 82.18 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 21 | 17 |
| 296 | 82.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 297 | 82.23 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 298 | 82.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 355 | 82.34 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 360 | 82.36 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 14 |
| 375 | 82.39 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 10 |
| 387 | 82.44 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 14 |
| 406 | 82.50 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 21 | 15 |
| 418 | 82.53 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 426 | 82.56 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 21 | 11 |
| 430 | 82.57 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 438 | 82.63 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 2 |
| 449 | 82.63 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 450 | 82.64 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 21 | 7 |
| 457 | 82.69 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 464 | 82.72 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 468 | 82.74 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 10 |
| 474 | 82.75 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 21 | 9 |
| 486 | 82.81 | radiation | 1.0 | 10 | < th | dose independent | rect. | 21 | 9 |
| 502 | 82.94 | wind | 9.0 | 90 | < th | dose independent | rect. | 21 | 7 |
| 509 | 82.96 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 510 | 82.96 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 7 |
| 511 | 82.96 | humidity | 50.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 514 | 82.96 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 515 | 82.96 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 7 |
| 520 | 82.96 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 521 | 82.96 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 522 | 82.96 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 7 |
| 536 | 83.00 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 7 |
| 542 | 83.02 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 562 | 83.06 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 603 | 83.19 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 611 | 83.22 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 625 | 83.26 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 19 | 6 |
| 648 | 83.36 | humidity | 50.0 | 90 | > th | dose independent | rect. | 16 | 15 |
| 660 | 83.39 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 670 | 83.44 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 21 | 7 |
| 672 | 83.44 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 21 | 7 |
| 691 | 83.54 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 17 |
| 693 | 83.54 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 738 | 83.72 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 740 | 83.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 17 |
| 741 | 83.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 757 | 83.79 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 764 | 83.81 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 21 | 7 |
| 829 | 83.92 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 830 | 83.92 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 848 | 83.93 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 869 | 83.98 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 914 | 84.10 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 4 |
| 916 | 84.10 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 921 | 84.12 | temperature | 20.0 | 10 | > th | dose independent | rect. | 7 | 9 |
| 932 | 84.13 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 970 | 84.15 | radiation | 1.0 | 30 | > th | dose independent | sin | 11 | NA |