Os08g0433300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sialidase domain containing protein.
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Os08g0433300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sialidase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.78 | 0.433 | 10.9 | 0.142 | 0.979 | 1.88 | -1.43 | -2.28 | -0.628 | 20.7 | 25.03 | 25 | -- | -- |
| 86.84 | 0.434 | 10.9 | 0.423 | 0.962 | 1.69 | -1.35 | -- | -0.586 | 20.6 | 24.85 | 23 | -- | -- |
| 90.57 | 0.443 | 10.9 | 0.284 | 0.988 | 1.71 | -- | -1.82 | -0.589 | 20.1 | 25.2 | 22 | -- | -- |
| 91.58 | 0.446 | 10.9 | 0.485 | 1.02 | 1.52 | -- | -- | -0.542 | 20.1 | 25.01 | 18 | -- | -- |
| 120.86 | 0.512 | 10.9 | -0.0948 | -- | 2.02 | -- | -3.35 | -0.749 | -- | 24.3 | 323 | -- | -- |
| 126.3 | 0.527 | 10.9 | 0.711 | 1.29 | -- | -0.0715 | -- | -0.416 | 18.3 | -- | -- | -- | -- |
| 126.31 | 0.526 | 10.9 | 0.712 | 1.29 | -- | -- | -- | -0.416 | 18.3 | -- | -- | -- | -- |
| 125.23 | 0.521 | 10.9 | 0.383 | -- | 1.75 | -- | -- | -0.621 | -- | 24.14 | 310 | -- | -- |
| 97.36 | 0.46 | 10.9 | -- | 1 | 1.62 | -- | -- | -0.607 | 20.2 | 24.96 | 18 | -- | -- |
| 212.75 | 0.682 | 10.8 | 0.678 | -- | -- | -- | -- | -0.444 | -- | -- | -- | -- | -- |
| 139.68 | 0.553 | 10.9 | -- | 1.28 | -- | -- | -- | -0.496 | 18.3 | -- | -- | -- | -- |
| 129.04 | 0.529 | 10.9 | -- | -- | 1.8 | -- | -- | -0.672 | -- | 24.09 | 310 | -- | -- |
| 224.87 | 0.7 | 10.9 | -- | -- | -- | -- | -- | -0.519 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.50 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 2 | 80.53 | temperature | 20 | 270 | > th | dose dependent | sin | 2 | NA |
| 5 | 81.16 | temperature | 10 | 270 | > th | dose dependent | sin | 2 | NA |
| 6 | 81.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 10 | 81.51 | temperature | 25 | 720 | < th | dose independent | rect. | 5 | 7 |
| 14 | 81.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 20 | 82.00 | temperature | 25 | 270 | < th | dose independent | sin | 2 | NA |
| 51 | 82.99 | temperature | 30 | 270 | < th | dose dependent | sin | 2 | NA |
| 62 | 83.25 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 13 |
| 64 | 83.29 | temperature | 25 | 30 | > th | dose dependent | rect. | 7 | 17 |
| 68 | 83.45 | temperature | 25 | 30 | > th | dose dependent | rect. | 7 | 15 |
| 72 | 83.53 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 96 | 83.77 | temperature | 25 | 90 | > th | dose dependent | rect. | 18 | 23 |
| 115 | 84.04 | temperature | 25 | 270 | > th | dose independent | sin | 1 | NA |
| 117 | 84.06 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 10 |
| 132 | 84.24 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 5 |
| 139 | 84.30 | temperature | 25 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 145 | 84.37 | temperature | 25 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 146 | 84.37 | temperature | 25 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 155 | 84.44 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 11 |
| 169 | 84.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 13 |
| 188 | 84.67 | temperature | 25 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 190 | 84.71 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 12 |
| 192 | 84.71 | temperature | 25 | 30 | > th | dose dependent | rect. | 1 | 19 |
| 231 | 84.94 | temperature | 25 | 30 | > th | dose dependent | no | NA | NA |
| 237 | 84.98 | temperature | 25 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 259 | 85.09 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 7 |
| 419 | 85.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 577 | 86.81 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 592 | 86.91 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 16 |
| 662 | 87.19 | temperature | 25 | 90 | > th | dose dependent | rect. | 23 | 18 |