Os08g0432500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATP-dependent Clp protease adaptor protein ClpS family protein.
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Os08g0432500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ATP-dependent Clp protease adaptor protein ClpS family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.16 | 0.446 | 13.8 | 0.333 | 3.42 | -0.726 | 0.291 | 0.425 | -0.0035 | 9.07 | 19.3 | 6 | -- | -- |
| 90.86 | 0.447 | 13.9 | 0.281 | 3.42 | -0.774 | 0.406 | -- | -0.0165 | 9.08 | 19.3 | 6 | -- | -- |
| 90.41 | 0.443 | 13.8 | 0.35 | 3.42 | -0.726 | -- | 0.498 | -0.00081 | 9.08 | 19.34 | 4 | -- | -- |
| 91.2 | 0.445 | 13.9 | 0.315 | 3.41 | -0.809 | -- | -- | -0.0132 | 9.08 | 19.06 | 5 | -- | -- |
| 724.61 | 1.26 | 14 | -0.335 | -- | 0.533 | -- | -1.96 | -0.194 | -- | 28.17 | 9 | -- | -- |
| 108.77 | 0.489 | 13.9 | 0.0504 | 3.34 | -- | 0.589 | -- | -0.128 | 8.93 | -- | -- | -- | -- |
| 109.96 | 0.491 | 13.9 | 0.0704 | 3.33 | -- | -- | -- | -0.128 | 8.93 | -- | -- | -- | -- |
| 682.71 | 1.22 | 13.9 | 0.502 | -- | -1.32 | -- | -- | 0.26 | -- | 21.2 | 688 | -- | -- |
| 93.67 | 0.451 | 13.9 | -- | 3.39 | -0.737 | -- | -- | -0.0354 | 9.04 | 19.04 | 11 | -- | -- |
| 745.75 | 1.28 | 14 | 0.0689 | -- | -- | -- | -- | -0.105 | -- | -- | -- | -- | -- |
| 110.09 | 0.491 | 13.9 | -- | 3.33 | -- | -- | -- | -0.136 | 8.93 | -- | -- | -- | -- |
| 517.85 | 1.06 | 13.9 | -- | -- | -2.15 | -- | -- | 0.43 | -- | 26.02 | 680 | -- | -- |
| 745.88 | 1.27 | 14 | -- | -- | -- | -- | -- | -0.113 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.11 | temperature | 20 | 10 | > th | dose independent | rect. | 16 | 18 |
| 3 | 80.66 | temperature | 20 | 10 | > th | dose independent | rect. | 16 | 12 |
| 8 | 82.62 | temperature | 20 | 30 | > th | dose independent | rect. | 16 | 10 |
| 15 | 83.11 | temperature | 20 | 90 | > th | dose independent | rect. | 15 | 20 |
| 26 | 84.50 | temperature | 20 | 10 | > th | dose independent | sin | 12 | NA |
| 74 | 86.54 | temperature | 20 | 10 | < th | dose independent | sin | 12 | NA |
| 77 | 86.66 | temperature | 20 | 90 | < th | dose independent | sin | 13 | NA |
| 85 | 86.81 | temperature | 20 | 90 | < th | dose independent | rect. | 15 | 14 |
| 88 | 86.87 | temperature | 20 | 90 | < th | dose independent | rect. | 17 | 12 |
| 96 | 87.13 | temperature | 20 | 90 | < th | dose independent | rect. | 12 | 17 |
| 107 | 87.37 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 9 |
| 116 | 87.54 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 12 |
| 129 | 87.69 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 10 |
| 149 | 87.87 | temperature | 20 | 10 | < th | dose independent | rect. | 14 | 14 |
| 173 | 88.09 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 182 | 88.18 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 190 | 88.25 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 8 |
| 194 | 88.30 | temperature | 20 | 10 | < th | dose independent | rect. | 20 | 8 |
| 232 | 88.55 | temperature | 20 | 10 | < th | dose independent | rect. | 12 | 16 |
| 259 | 88.68 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 8 |
| 322 | 89.13 | temperature | 25 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 433 | 89.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 10 |
| 444 | 89.82 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 446 | 89.82 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 455 | 89.89 | temperature | 25 | 270 | < th | dose dependent | sin | 16 | NA |
| 462 | 89.96 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 467 | 89.96 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 490 | 90.05 | temperature | 25 | 90 | < th | dose dependent | sin | 14 | NA |
| 566 | 90.33 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 14 |
| 598 | 90.45 | temperature | 25 | 10 | < th | dose dependent | sin | 13 | NA |
| 694 | 90.81 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 1 |
| 811 | 91.23 | temperature | 20 | 10 | < th | dose independent | rect. | 10 | 20 |
| 884 | 91.58 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 12 |
| 932 | 91.77 | temperature | 20 | 10 | > th | dose independent | no | NA | NA |