Os08g0430000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0430000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.97 | 0.235 | 11.2 | 1.19 | 0.25 | -0.901 | 0.108 | 0.582 | 0.33 | 4.67 | 20.4 | 1548 | -- | -- |
| 25.3 | 0.234 | 11.3 | 1.03 | 0.242 | -0.876 | 0.109 | -- | 0.278 | 4.72 | 20.21 | 1561 | -- | -- |
| 24.99 | 0.233 | 11.2 | 1.18 | 0.25 | -0.89 | -- | 0.578 | 0.326 | 4.6 | 20.62 | 1547 | -- | -- |
| 25.32 | 0.234 | 11.3 | 1.02 | 0.252 | -0.879 | -- | -- | 0.28 | 4.68 | 20.21 | 1548 | -- | -- |
| 27.05 | 0.242 | 11.2 | 1.26 | -- | -0.951 | -- | 0.868 | 0.352 | -- | 21.3 | 1802 | -- | -- |
| 49.07 | 0.328 | 11.3 | 0.689 | 0.237 | -- | 0.0753 | -- | 0.0748 | 5.02 | -- | -- | -- | -- |
| 49.09 | 0.328 | 11.3 | 0.689 | 0.238 | -- | -- | -- | 0.0745 | 5 | -- | -- | -- | -- |
| 27.49 | 0.244 | 11.3 | 1.03 | -- | -0.927 | -- | -- | 0.287 | -- | 20.52 | 1807 | -- | -- |
| 48.44 | 0.326 | 11.3 | -- | 0.203 | -0.897 | -- | -- | 0.129 | 11.1 | 20.21 | 1548 | -- | -- |
| 52.06 | 0.337 | 11.3 | 0.697 | -- | -- | -- | -- | 0.0806 | -- | -- | -- | -- | -- |
| 61.59 | 0.367 | 11.3 | -- | 0.25 | -- | -- | -- | -0.00224 | 4.9 | -- | -- | -- | -- |
| 49.01 | 0.326 | 11.3 | -- | -- | -0.768 | -- | -- | 0.112 | -- | 20.38 | 332 | -- | -- |
| 64.89 | 0.376 | 11.3 | -- | -- | -- | -- | -- | 0.00318 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.71 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 2 | 24.73 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 20 |
| 47 | 25.01 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 7 | NA |
| 63 | 25.06 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 67 | 25.07 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 68 | 25.08 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 69 | 25.08 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 77 | 25.09 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 80 | 25.10 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 86 | 25.10 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 95 | 25.13 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 101 | 25.13 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 103 | 25.13 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 126 | 25.17 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 9 |
| 143 | 25.20 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 207 | 25.29 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 257 | 25.37 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 277 | 25.40 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 356 | 25.53 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 361 | 25.54 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 367 | 25.54 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 421 | 25.61 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 10 |
| 461 | 25.67 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 486 | 25.71 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 487 | 25.71 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 510 | 25.73 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 516 | 25.74 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 557 | 25.79 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 569 | 25.80 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 606 | 25.83 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 616 | 25.83 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 648 | 25.86 | temperature | 30.0 | 270 | < th | dose dependent | no | NA | NA |
| 649 | 25.86 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 741 | 25.90 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 957 | 26.00 | temperature | 15.0 | 90 | > th | dose dependent | no | NA | NA |