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Os08g0414300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.29 (0.0172) R2 : 0.0152
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0963 (0.0363) R2dN8 : 0.0196 R2N8 : 0.0152
σ : 0.325
deviance : 48.4
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.35 0.271 9.31 -0.148 0.49 -0.518 -0.568 -0.567 -0.00294 2.08 25.1 3 -- --
33.78 0.273 9.32 -0.236 0.48 -0.471 -0.771 -- -0.0206 2.01 25.1 3 -- --
34.25 0.275 9.3 -0.0673 0.497 -0.548 -- -0.992 0.0132 2.2 25.1 3 -- --
35.8 0.279 9.31 -0.224 0.558 -0.605 -- -- -0.00677 2.52 36.79 46 -- --
46.56 0.318 9.28 -0.0131 -- -0.249 -- -0.824 0.0795 -- 24.1 5 -- --
37.12 0.286 9.3 -0.126 0.385 -- -0.774 -- 0.073 2.1 -- -- -- --
39.32 0.294 9.3 -0.103 0.388 -- -- -- 0.0771 2.44 -- -- -- --
43.51 0.307 9.31 -0.243 -- -0.531 -- -- -0.0048 -- 109.7 1080 -- --
36.99 0.283 9.31 -- 0.523 -0.494 -- -- 0.0306 2.51 48.28 46 -- --
48.2 0.324 9.29 -0.0869 -- -- -- -- 0.0867 -- -- -- -- --
39.6 0.294 9.29 -- 0.386 -- -- -- 0.0886 2.44 -- -- -- --
44.88 0.312 9.3 -- -- -0.432 -- -- 0.0361 -- 118.6 1076 -- --
48.4 0.325 9.29 -- -- -- -- -- 0.0963 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.17 temperature 15.0 270 > th dose independent rect. 1 16
2 28.27 humidity 50.0 270 > th dose independent rect. 5 8
4 28.43 radiation 10.0 270 < th dose dependent rect. 8 16
9 28.68 temperature 10.0 270 > th dose independent rect. 5 8
10 28.68 atmosphere 995.0 270 > th dose independent rect. 5 8
11 28.68 atmosphere 1015.0 270 < th dose independent rect. 5 8
12 28.68 temperature 10.0 270 > th dose independent rect. 13 16
15 28.75 wind 9.0 270 < th dose independent rect. 13 16
16 28.76 precipitation 0.1 270 < th dose independent rect. 5 8
17 28.76 precipitation 0.1 270 < th dose dependent rect. 5 8
19 28.79 temperature 10.0 90 > th dose dependent rect. 2 17
21 28.83 wind 7.0 270 < th dose independent rect. 24 17
23 28.87 radiation 10.0 270 < th dose independent rect. 17 8
26 28.87 precipitation 0.1 270 < th dose independent rect. 13 16
27 28.87 precipitation 0.1 270 < th dose dependent rect. 13 16
29 28.90 radiation 1.0 270 < th dose independent rect. 8 16
31 28.93 radiation 20.0 270 < th dose dependent rect. 17 8
32 28.94 humidity 50.0 270 > th dose independent rect. 17 8
39 29.01 wind 9.0 270 < th dose independent rect. 5 8
42 29.03 temperature 10.0 270 > th dose independent rect. 17 8
43 29.03 atmosphere 995.0 270 > th dose independent rect. 17 8
48 29.03 atmosphere 1015.0 270 < th dose independent rect. 1 16
49 29.04 wind 9.0 270 < th dose independent rect. 17 8
59 29.10 precipitation 0.1 270 < th dose independent rect. 17 8
60 29.10 precipitation 0.1 270 < th dose independent rect. 1 16
61 29.10 precipitation 0.1 270 < th dose dependent rect. 17 8
62 29.10 precipitation 0.1 270 < th dose dependent rect. 1 16
64 29.11 wind 9.0 90 < th dose dependent rect. 2 17
69 29.13 temperature 10.0 270 > th dose dependent rect. 13 16
76 29.16 wind 9.0 270 < th dose dependent rect. 24 17
77 29.17 humidity 50.0 270 > th dose independent rect. 6 18
83 29.19 temperature 10.0 270 > th dose dependent rect. 24 18
113 29.31 temperature 10.0 10 > th dose dependent rect. 2 18
118 29.34 wind 1.0 270 > th dose independent rect. 5 8
126 29.40 precipitation 0.1 90 < th dose independent rect. 19 7
128 29.40 precipitation 0.1 90 < th dose dependent rect. 19 7
147 29.47 wind 1.0 270 > th dose independent rect. 17 8
157 29.48 atmosphere 1015.0 270 < th dose independent rect. 13 16
160 29.48 temperature 10.0 270 > th dose dependent rect. 11 7
173 29.52 atmosphere 1015.0 270 < th dose dependent rect. 11 7
195 29.57 temperature 30.0 270 < th dose independent rect. 17 7
212 29.62 temperature 30.0 90 < th dose independent rect. 19 7
258 29.64 radiation 10.0 270 < th dose dependent sin 17 NA
283 29.67 atmosphere 1000.0 270 > th dose dependent rect. 24 5
299 29.71 atmosphere 995.0 270 > th dose independent rect. 13 16
322 29.76 atmosphere 995.0 270 > th dose independent rect. 1 16
346 29.84 temperature 15.0 270 > th dose independent rect. 11 8
357 29.86 wind 1.0 270 > th dose independent rect. 13 16
393 29.92 atmosphere 1010.0 270 < th dose independent rect. 11 8
400 29.92 wind 9.0 270 < th dose dependent rect. 13 16
404 29.94 wind 5.0 270 < th dose independent rect. 24 6
425 29.98 temperature 10.0 270 > th dose dependent rect. 24 6
457 30.04 atmosphere 995.0 270 > th dose independent rect. 6 18
471 30.07 atmosphere 1005.0 270 > th dose independent rect. 24 5
474 30.07 humidity 80.0 270 > th dose independent rect. 24 6
477 30.07 wind 9.0 270 < th dose dependent rect. 24 6
486 30.08 temperature 30.0 10 < th dose dependent rect. 8 18
514 30.14 radiation 1.0 270 < th dose independent sin 18 NA
518 30.14 humidity 50.0 270 > th dose independent rect. 19 16
525 30.15 precipitation 0.1 270 < th dose independent rect. 11 8
529 30.15 precipitation 0.1 270 < th dose dependent rect. 11 8
536 30.16 wind 7.0 270 < th dose independent rect. 23 8
544 30.17 atmosphere 1015.0 270 < th dose independent rect. 23 8
545 30.17 atmosphere 995.0 270 > th dose independent rect. 7 16
546 30.17 atmosphere 1015.0 270 < th dose dependent rect. 13 4
563 30.19 temperature 10.0 270 > th dose independent rect. 24 6
565 30.19 temperature 30.0 270 < th dose independent rect. 24 6
566 30.19 humidity 50.0 270 > th dose independent rect. 24 6
569 30.19 atmosphere 995.0 270 > th dose independent rect. 24 6
571 30.19 atmosphere 1015.0 270 < th dose independent rect. 24 6
572 30.19 radiation 20.0 270 < th dose independent rect. 24 6
576 30.19 temperature 10.0 270 > th dose independent rect. 6 18
591 30.21 radiation 1.0 270 < th dose independent rect. 24 7
593 30.21 wind 9.0 270 < th dose independent rect. 11 8
598 30.21 temperature 10.0 270 > th dose independent rect. 19 16
600 30.21 atmosphere 995.0 270 > th dose independent rect. 19 16
619 30.22 radiation 40.0 270 < th dose dependent rect. 24 6
620 30.22 radiation 20.0 270 < th dose dependent rect. 24 7
623 30.23 precipitation 0.1 270 < th dose independent rect. 24 6
632 30.23 precipitation 0.1 270 < th dose dependent rect. 24 6
633 30.23 radiation 40.0 270 < th dose dependent rect. 23 8
672 30.27 wind 1.0 270 > th dose independent rect. 7 16
673 30.27 precipitation 0.1 270 < th dose independent rect. 19 16
674 30.27 precipitation 0.1 270 < th dose independent rect. 6 18
680 30.27 precipitation 0.1 270 < th dose dependent rect. 19 16
681 30.27 precipitation 0.1 270 < th dose dependent rect. 6 18
701 30.30 temperature 25.0 270 > th dose independent rect. 13 3
706 30.30 temperature 10.0 270 > th dose independent rect. 23 8
707 30.30 temperature 30.0 270 < th dose independent rect. 23 8
708 30.30 humidity 50.0 270 > th dose independent rect. 23 8
710 30.30 atmosphere 995.0 270 > th dose independent rect. 23 8
711 30.30 radiation 40.0 270 < th dose independent rect. 23 8
712 30.30 temperature 10.0 270 > th dose independent rect. 7 16
748 30.32 temperature 10.0 10 > th dose dependent rect. 24 20
753 30.33 wind 1.0 270 > th dose independent rect. 6 18
757 30.34 humidity 90.0 270 < th dose independent rect. 11 7
758 30.34 precipitation 0.1 270 < th dose independent rect. 23 8
760 30.34 precipitation 0.1 270 < th dose dependent rect. 23 8
764 30.35 wind 9.0 270 < th dose independent rect. 19 16
822 30.40 precipitation 0.1 270 < th dose independent rect. 7 16
833 30.40 precipitation 0.1 270 < th dose dependent rect. 7 16
862 30.42 temperature 10.0 10 > th dose dependent rect. 13 7
864 30.42 humidity 50.0 270 > th dose dependent rect. 17 7
869 30.43 temperature 25.0 270 > th dose independent rect. 12 5
876 30.43 humidity 50.0 90 > th dose dependent rect. 19 7
884 30.44 temperature 30.0 270 < th dose independent rect. 5 8
893 30.44 humidity 50.0 270 > th dose dependent rect. 7 17
909 30.45 radiation 40.0 270 < th dose independent rect. 13 16
911 30.45 wind 9.0 270 < th dose independent rect. 6 18
975 30.48 temperature 10.0 10 > th dose dependent rect. 15 15
982 30.49 radiation 1.0 270 > th dose independent rect. 12 17
991 30.50 radiation 1.0 270 > th dose independent rect. 12 7