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Os08g0410300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Major facilitator superfamily protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.42 (0.0281) R2 : 0.587
β1 : 2.08 (0.104) R2dD : 0.397 R2D : 0.0698
β2 : 1.1 (0.0777) R2dC : 0.265 R2C : -0.201
β3 : -2.33 (0.115) R2dE : 0.615 R2E : -0.185
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.812 (0.0636) R2dN8 : 0.222 R2N8 : -0.13
σ : 0.513
deviance : 121.19
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C
peak time of C : 12.6
E
wheather : temperature
threshold : 19.87
memory length : 617
response mode : > th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 0.7
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
117.74 0.51 9.37 2.55 1.05 -2.37 -0.433 2.23 0.939 12.8 20.31 637 0.879 --
122.38 0.515 9.43 2.13 0.913 -2.13 -0.246 -- 0.824 13 20.24 706 1.09 --
117.86 0.506 9.39 2.4 1.19 -2.51 -- 1.77 0.883 13 20.09 592 0.34 --
121.19 0.513 9.42 2.08 1.1 -2.33 -- -- 0.812 12.6 19.87 617 0.7 --
137.99 0.547 9.41 2.37 -- -1.82 -- 0.887 0.842 -- 21.2 2433 2.45 --
230.49 0.712 9.55 1.49 0.264 -- -0.474 -- 0.287 13.7 -- -- -- --
231.38 0.712 9.55 1.48 0.264 -- -- -- 0.284 13.6 -- -- -- --
138.59 0.548 9.45 2.1 -- -1.75 -- -- 0.76 -- 21.2 2446 2.39 --
222.33 0.694 9.5 -- 0.879 -1.92 -- -- 0.442 12.8 21.3 499 0.244 --
235.63 0.717 9.55 1.46 -- -- -- -- 0.279 -- -- -- -- --
288.73 0.795 9.59 -- 0.238 -- -- -- 0.12 13.4 -- -- -- --
237.65 0.718 9.51 -- -- -1.43 -- -- 0.467 -- 21.9 1085 3.55 --
292.21 0.798 9.59 -- -- -- -- -- 0.116 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 116.74 temperature 20 720 > th dose dependent rect. 21 16
3 118.63 temperature 20 720 > th dose dependent sin 7 NA
5 119.91 temperature 10 720 > th dose dependent rect. 21 16
17 123.07 temperature 20 720 > th dose dependent rect. 1 8
26 124.72 temperature 20 720 > th dose dependent rect. 1 10
80 128.83 temperature 10 720 > th dose dependent rect. 1 8
88 129.14 temperature 30 720 < th dose dependent sin 7 NA
90 129.25 temperature 30 720 < th dose dependent rect. 20 16
227 135.68 temperature 30 720 < th dose dependent rect. 3 7
256 136.62 temperature 20 270 > th dose dependent rect. 1 21
263 136.80 temperature 25 4320 > th dose dependent rect. 6 7
326 137.80 temperature 20 1440 > th dose dependent rect. 18 1
330 137.86 temperature 25 4320 > th dose dependent rect. 7 2
346 138.06 temperature 30 14400 > th dose independent rect. 15 1
347 138.06 temperature 25 4320 > th dose dependent sin 5 NA
348 138.07 temperature 30 14400 < th dose independent rect. 15 1
395 138.63 wind 9 43200 > th dose dependent rect. 19 11
413 138.80 temperature 30 1440 < th dose dependent rect. 18 1
414 138.81 temperature 20 1440 > th dose dependent rect. 18 3
441 139.14 temperature 25 4320 > th dose independent rect. 7 1
480 139.59 temperature 20 4320 > th dose dependent rect. 17 21
540 139.84 temperature 20 4320 > th dose dependent rect. 7 21
582 140.04 temperature 20 4320 > th dose dependent rect. 23 23
587 140.05 temperature 20 4320 > th dose dependent rect. 13 23
589 140.05 temperature 20 4320 > th dose dependent rect. 21 23
595 140.07 temperature 20 4320 > th dose dependent no NA NA
619 140.12 temperature 20 4320 > th dose dependent rect. 3 23
767 140.54 temperature 10 720 > th dose dependent rect. 1 23
866 140.90 temperature 20 4320 > th dose dependent sin 17 NA
961 141.20 temperature 30 14400 < th dose independent rect. 15 18