Os08g0396700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DC1 domain containing protein.
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Os08g0396700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DC1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.31 | 0.323 | 6.35 | 1.1 | 1.33 | -0.533 | -0.867 | -3.51 | -0.0731 | 6.49 | 19.5 | 5841 | -- | -- |
| 56.54 | 0.35 | 6.48 | 0.691 | 1.38 | 0.696 | -1.05 | -- | -0.248 | 6.68 | 16 | 6222 | -- | -- |
| 48.67 | 0.325 | 6.36 | 1.06 | 1.33 | -0.519 | -- | -3.46 | -0.0785 | 6.53 | 19.4 | 6289 | -- | -- |
| 55.75 | 0.348 | 6.49 | 0.886 | 1.32 | 0.926 | -- | -- | -0.141 | 6.48 | 16 | 6282 | -- | -- |
| 140.05 | 0.551 | 6.37 | 1.07 | -- | -0.585 | -- | -3.66 | -0.0506 | -- | 19.31 | 6373 | -- | -- |
| 62.56 | 0.371 | 6.51 | 0.52 | 1.33 | -- | -0.798 | -- | -0.25 | 6.46 | -- | -- | -- | -- |
| 64.15 | 0.375 | 6.51 | 0.51 | 1.33 | -- | -- | -- | -0.248 | 6.48 | -- | -- | -- | -- |
| 147.18 | 0.565 | 6.52 | 0.84 | -- | 0.532 | -- | -- | -0.169 | -- | 12.5 | 10818 | -- | -- |
| 70.27 | 0.39 | 6.52 | -- | 1.33 | 0.438 | -- | -- | -0.295 | 6.44 | 14.33 | 3682 | -- | -- |
| 155.81 | 0.583 | 6.54 | 0.543 | -- | -- | -- | -- | -0.22 | -- | -- | -- | -- | -- |
| 70.99 | 0.394 | 6.52 | -- | 1.33 | -- | -- | -- | -0.304 | 6.46 | -- | -- | -- | -- |
| 162.91 | 0.594 | 6.55 | -- | -- | 0.476 | -- | -- | -0.276 | -- | 13.98 | 3603 | -- | -- |
| 163.58 | 0.597 | 6.55 | -- | -- | -- | -- | -- | -0.28 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.25 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 2 | 45.30 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 55 | 45.88 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 59 | 45.90 | wind | 1 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 93 | 46.05 | radiation | 1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 105 | 46.08 | radiation | 1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 125 | 46.15 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 157 | 46.27 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 17 |
| 180 | 46.34 | wind | 1 | 43200 | < th | dose independent | rect. | 15 | 11 |
| 252 | 46.54 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 16 |
| 253 | 46.54 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 16 |
| 254 | 46.54 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 18 |
| 262 | 46.56 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 263 | 46.56 | temperature | 15 | 4320 | > th | dose dependent | sin | 13 | NA |
| 264 | 46.56 | temperature | 30 | 4320 | < th | dose dependent | sin | 13 | NA |
| 268 | 46.57 | wind | 1 | 43200 | > th | dose independent | rect. | 14 | 12 |
| 349 | 46.68 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 405 | 46.81 | wind | 1 | 43200 | < th | dose independent | rect. | 8 | 18 |
| 422 | 46.85 | wind | 1 | 43200 | < th | dose dependent | sin | 18 | NA |
| 442 | 46.88 | radiation | 1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 462 | 46.90 | radiation | 1 | 43200 | < th | dose dependent | rect. | 8 | 10 |
| 569 | 47.10 | radiation | 1 | 43200 | < th | dose dependent | rect. | 14 | 4 |
| 591 | 47.13 | humidity | 60 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 654 | 47.21 | temperature | 25 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 655 | 47.21 | temperature | 10 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 656 | 47.21 | temperature | 30 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 676 | 47.23 | temperature | 25 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 683 | 47.24 | temperature | 25 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 690 | 47.25 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 691 | 47.25 | temperature | 25 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 711 | 47.27 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 10 |
| 752 | 47.29 | temperature | 10 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 759 | 47.29 | temperature | 10 | 43200 | > th | dose dependent | rect. | 21 | 7 |
| 811 | 47.32 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 813 | 47.32 | temperature | 10 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 877 | 47.35 | temperature | 10 | 43200 | > th | dose dependent | rect. | 1 | 3 |
| 891 | 47.36 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 905 | 47.37 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |