Os08g0392300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0392300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 287.09 | 0.796 | 2.8 | 0.964 | 0.191 | -2.02 | 0.663 | 17.5 | -0.0305 | 22.4 | 0.8003 | 325 | 4.08 | 1.08 |
| 351.74 | 0.88 | 2.9 | 0.541 | 0.0261 | 0.731 | 0.93 | -- | -0.0216 | 4.75 | 0.8003 | 325 | 4.08 | 1.08 |
| 288.56 | 0.791 | 2.8 | 0.932 | 0.193 | -2.08 | -- | 17.9 | -0.0311 | 22.5 | 0.6702 | 320 | 4.1 | 1.08 |
| 314.61 | 0.826 | 2.88 | 0.545 | 0.0773 | 3.04 | -- | -- | -0.0812 | 22.1 | 0.5997 | 317 | 4.68 | 0.334 |
| 290.69 | 0.794 | 2.8 | 0.944 | -- | -2.13 | -- | 17.8 | -0.0323 | -- | 0.6775 | 320 | 4.11 | 1.07 |
| 354.12 | 0.882 | 2.9 | 0.555 | 0.071 | -- | 0.979 | -- | -0.032 | 4.48 | -- | -- | -- | -- |
| 355.98 | 0.884 | 2.9 | 0.546 | 0.129 | -- | -- | -- | -0.0374 | 0.641 | -- | -- | -- | -- |
| 312.69 | 0.824 | 2.89 | 0.319 | -- | 3.42 | -- | -- | 0.0141 | -- | 0.1814 | 388 | 4.69 | 0.45 |
| 312.58 | 0.823 | 2.9 | -- | 0.094 | 3.58 | -- | -- | -0.0319 | 20.2 | 0.589 | 410 | 4.69 | 0.483 |
| 357.02 | 0.883 | 2.9 | 0.551 | -- | -- | -- | -- | -0.0352 | -- | -- | -- | -- | -- |
| 363.84 | 0.892 | 2.92 | -- | 0.138 | -- | -- | -- | -0.0983 | 0.83 | -- | -- | -- | -- |
| 314.9 | 0.826 | 2.9 | -- | -- | 3.55 | -- | -- | -0.0146 | -- | 0.6 | 410 | 4.69 | 0.481 |
| 365.03 | 0.892 | 2.91 | -- | -- | -- | -- | -- | -0.0963 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 300.63 | wind | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 4 | 308.20 | wind | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 10 | 318.96 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 6 |
| 12 | 320.74 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 1 |
| 13 | 320.74 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 1 |
| 15 | 321.98 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 22 | 2 |
| 17 | 321.98 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 22 | 2 |
| 28 | 322.82 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 10 |
| 30 | 322.84 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 6 |
| 32 | 322.92 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 65 | 325.12 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 68 | 325.19 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 69 | 325.19 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 74 | 325.45 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 90 | 326.72 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 22 | 1 |
| 91 | 326.72 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 134 | 328.49 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 9 |
| 159 | 329.39 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 193 | 330.21 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 13 |
| 206 | 330.56 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 15 | 7 |
| 214 | 330.73 | wind | 1.0 | 90 | < th | dose dependent | sin | 2 | NA |
| 233 | 331.16 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 11 |
| 248 | 331.36 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 252 | 331.37 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 4 |
| 258 | 331.37 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 4 |
| 268 | 331.40 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 2 |
| 272 | 331.40 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 2 |
| 291 | 331.68 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 1 |
| 294 | 331.68 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 301 | 331.80 | wind | 7.0 | 270 | > th | dose independent | rect. | 20 | 2 |
| 305 | 331.85 | precipitation | 0.1 | 270 | > th | dose independent | sin | 15 | NA |
| 306 | 331.87 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 315 | 331.96 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 395 | 333.01 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 406 | 333.17 | wind | 7.0 | 270 | > th | dose dependent | rect. | 20 | 2 |
| 411 | 333.21 | precipitation | 0.1 | 270 | < th | dose independent | sin | 15 | NA |
| 412 | 333.21 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 15 | NA |
| 441 | 333.46 | wind | 5.0 | 30 | > th | dose dependent | rect. | 21 | 8 |
| 446 | 333.49 | wind | 5.0 | 30 | > th | dose dependent | rect. | 21 | 5 |
| 496 | 334.00 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 11 |
| 511 | 334.11 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 4 | 4 |
| 521 | 334.20 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 5 | 2 |
| 522 | 334.21 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 570 | 334.61 | wind | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 607 | 334.89 | wind | 5.0 | 10 | > th | dose independent | rect. | 22 | 3 |
| 656 | 335.18 | wind | 5.0 | 30 | > th | dose independent | rect. | 21 | 9 |
| 682 | 335.42 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 20 |
| 686 | 335.53 | wind | 1.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 759 | 335.93 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 794 | 336.06 | humidity | 80.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 803 | 336.14 | wind | 1.0 | 90 | < th | dose independent | sin | 3 | NA |
| 831 | 336.41 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 14 | NA |
| 855 | 336.61 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 918 | 337.16 | wind | 7.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 981 | 337.73 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 4 | 19 |