BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0392300 Os08g0392300|Os08g0392300
(282 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G30830.1 | chr2:13132707-13134284 REVERSE LENGTH=359 80 1e-15
AT1G06620.1 | chr1:2025618-2027094 FORWARD LENGTH=366 79 2e-15
AT1G06645.1 | chr1:2034229-2035499 FORWARD LENGTH=367 76 2e-14
AT1G06640.1 | chr1:2032366-2033775 FORWARD LENGTH=370 76 2e-14
AT2G30840.1 | chr2:13135581-13136833 REVERSE LENGTH=363 76 3e-14
AT1G06650.2 | chr1:2035909-2037186 FORWARD LENGTH=370 75 5e-14
AT2G25450.1 | chr2:10830286-10831563 REVERSE LENGTH=360 69 4e-12
AT1G03410.1 | chr1:844782-846574 REVERSE LENGTH=399 62 5e-10
AT3G61400.1 | chr3:22718956-22720397 FORWARD LENGTH=371 60 1e-09
AT1G03400.1 | chr1:842895-844158 REVERSE LENGTH=352 60 2e-09
AT5G59540.1 | chr5:23996293-23997576 REVERSE LENGTH=367 59 3e-09
AT1G04350.1 | chr1:1165296-1166538 FORWARD LENGTH=361 59 3e-09
AT5G24530.1 | chr5:8378964-8383154 FORWARD LENGTH=342 54 1e-07
AT1G04380.1 | chr1:1177142-1178384 REVERSE LENGTH=346 52 3e-07
AT5G59530.1 | chr5:23994434-23995715 REVERSE LENGTH=365 52 4e-07
AT5G43440.1 | chr5:17455356-17456608 REVERSE LENGTH=366 52 5e-07
AT5G43450.1 | chr5:17457321-17458714 REVERSE LENGTH=363 50 1e-06
>AT2G30830.1 | chr2:13132707-13134284 REVERSE LENGTH=359
Length = 358
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 49/69 (71%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPLEAKAPYYTRDVGSKVRFSSNYDLFRPPAANW 201
FFQV+NH + E+ ++M +R FHE+ E K +Y+RD+ KV++++N+DL+ AANW
Sbjct: 86 FFQVINHGIPLEVMESMKDGIRGFHEQDSEVKKTFYSRDITKKVKYNTNFDLYSSQAANW 145
Query: 202 RDTLFMEMA 210
RDTL M MA
Sbjct: 146 RDTLTMVMA 154
>AT1G06620.1 | chr1:2025618-2027094 FORWARD LENGTH=366
Length = 365
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPLEAKAPYYTRDVGSKVRFSSNYDLFRPPAANW 201
FFQV+NH + ++ + M+ +R FHE+ E K +Y+RD SK+ +SSN+DLF PAANW
Sbjct: 93 FFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANW 152
Query: 202 RDTL 205
RDTL
Sbjct: 153 RDTL 156
>AT1G06645.1 | chr1:2034229-2035499 FORWARD LENGTH=367
Length = 366
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPLEAKAPYYTRDVGSKVRFSSNYDLFRPPAANW 201
FFQV+NH V+ EL + M VR FHE+ E + +Y+RD+ K ++SSN+DL+ PAANW
Sbjct: 96 FFQVINHGVSLELLEKMKDGVRGFHEQSPEVRKDFYSRDLTRKFQYSSNFDLYSSPAANW 155
Query: 202 RDTL 205
RDT+
Sbjct: 156 RDTV 159
>AT1G06640.1 | chr1:2032366-2033775 FORWARD LENGTH=370
Length = 369
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPLEAKAPYYTRDVGSKVRFSSNYDLFRPPAANW 201
FFQV+NH V+ EL + M VR FHE+P E + Y+RD G K + SN+DL+ AANW
Sbjct: 96 FFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYLSNFDLYTAAAANW 155
Query: 202 RDTLFMEMA 210
RDT + MA
Sbjct: 156 RDTFYCYMA 164
>AT2G30840.1 | chr2:13135581-13136833 REVERSE LENGTH=363
Length = 362
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPLEAKAPYYTRDVGSKVRFSSNYDLFRPPAANW 201
FFQV+NH ++ ++ + M +R FHE+ + + +YTRDV V+++SN+DL+ P+ANW
Sbjct: 90 FFQVINHGISNDVMEKMKDGIRGFHEQDSDVRKKFYTRDVTKTVKYNSNFDLYSSPSANW 149
Query: 202 RDTLFMEMA 210
RDTL MA
Sbjct: 150 RDTLSCFMA 158
>AT1G06650.2 | chr1:2035909-2037186 FORWARD LENGTH=370
Length = 369
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 44/69 (63%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPLEAKAPYYTRDVGSKVRFSSNYDLFRPPAANW 201
FFQV+NH V+ EL + M VR FHE+ E + +Y+RD + + SN+DLF PAANW
Sbjct: 96 FFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANW 155
Query: 202 RDTLFMEMA 210
RDT MA
Sbjct: 156 RDTFSCTMA 164
>AT2G25450.1 | chr2:10830286-10831563 REVERSE LENGTH=360
Length = 359
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPLEAKAPYYTRDVGSKVRFSSNYDLFRPPAANW 201
FFQ +NH V ++ + M+ +R FH++ E + +YTRD K+++ SN DL+ PAA+W
Sbjct: 86 FFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYESPAASW 145
Query: 202 RDTLFMEMA 210
RDTL MA
Sbjct: 146 RDTLSCVMA 154
>AT1G03410.1 | chr1:844782-846574 REVERSE LENGTH=399
Length = 398
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPLEAKAPYYTRDVGSKVRFSSNYDLFR-PPAAN 200
FFQVVNH ++ E+ + M +R FHE+ E K +Y+RD V + SN DL AAN
Sbjct: 125 FFQVVNHGISVEVMERMKEGIRRFHEQDPEVKKRFYSRDHTRDVLYYSNIDLHTCNKAAN 184
Query: 201 WRDTLFMEMA 210
WRDTL MA
Sbjct: 185 WRDTLACYMA 194
>AT3G61400.1 | chr3:22718956-22720397 FORWARD LENGTH=371
Length = 370
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPLEAKAPYYTRDVGSKVRFSSNYDLFRPPAANW 201
FFQVVNH + ++ + + +R FHE+ E K +Y+RD K+ + SN DLF A+W
Sbjct: 96 FFQVVNHGIPLDVLEKVKEGIRAFHEQDAELKKRFYSRDHTRKMVYYSNLDLFTAMKASW 155
Query: 202 RDTLFMEMA 210
RDT+ MA
Sbjct: 156 RDTMCAYMA 164
>AT1G03400.1 | chr1:842895-844158 REVERSE LENGTH=352
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPLEAKAPYYTRDVGSKVRFSSNYDLFRPPAANW 201
F +VNH + E+ + M+ +R FHE+ EAK +Y+RD V + SN+DL AA+W
Sbjct: 79 LFHLVNHGIPVEVLERMIQGIRGFHEQEPEAKKRFYSRDHTRDVLYFSNHDLQNSEAASW 138
Query: 202 RDTL 205
RDTL
Sbjct: 139 RDTL 142
>AT5G59540.1 | chr5:23996293-23997576 REVERSE LENGTH=367
Length = 366
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPLEAKAPYYTRDVGS-KVRFSSNYDLF-RPPAA 199
FFQV+NH + + + + VR FHEE E K +++RD G+ K ++SN+DL+ P+
Sbjct: 92 FFQVINHSIPLNVLEEIKDGVRRFHEEDPEVKKSFFSRDAGNKKFVYNSNFDLYSSSPSV 151
Query: 200 NWRDTL 205
NWRD+
Sbjct: 152 NWRDSF 157
>AT1G04350.1 | chr1:1165296-1166538 FORWARD LENGTH=361
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPLEAKAPYYTRDVGSKVRFSSNYDLFRPPA-AN 200
FFQV+NH V + + VR FHEE E K Y+TRD + ++SN+DL+ + N
Sbjct: 86 FFQVINHGVPLNVLQEIQDGVRRFHEEAPEVKKTYFTRDATKRFVYNSNFDLYSSSSCVN 145
Query: 201 WRDTLFMEMA 210
WRD+ MA
Sbjct: 146 WRDSFACYMA 155
>AT5G24530.1 | chr5:8378964-8383154 FORWARD LENGTH=342
Length = 341
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPLEAKAPYYTRDVGSKVRFSSNYDLFRPPAANW 201
FFQV+NH V K++ D M++ R F +E K Y+ D R S+++++ + NW
Sbjct: 64 FFQVINHGVNKQIIDEMVSVAREFFSMSMEEKMKLYSDDPTKTTRLSTSFNVKKEEVNNW 123
Query: 202 RDTL 205
RD L
Sbjct: 124 RDYL 127
>AT1G04380.1 | chr1:1177142-1178384 REVERSE LENGTH=346
Length = 345
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPLEAKAPYYTRDVGSKVRFSSNYDLFRPPAANW 201
FQV+NH V + + + V FHEE E K Y++ D+ + +N++L+ A NW
Sbjct: 73 IFQVINHGVPLSVLEEIQNGVVRFHEEDPEVKKSYFSLDLTKTFIYHNNFELYSSSAGNW 132
Query: 202 RDTLFMEM 209
RD+ M
Sbjct: 133 RDSFVCYM 140
>AT5G59530.1 | chr5:23994434-23995715 REVERSE LENGTH=365
Length = 364
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPL-EAKAPYYTRD-VGSKVRFSSNYDLF-RPPA 198
FFQV+NH V + + + VR FHEE E K YY+ D +K +SSN+DL+ P+
Sbjct: 89 FFQVINHGVPLNVLEEIKDGVRRFHEEEDPEVKKSYYSLDFTKNKFAYSSNFDLYSSSPS 148
Query: 199 ANWRDTLFMEMA 210
WRD++ MA
Sbjct: 149 LTWRDSISCYMA 160
>AT5G43440.1 | chr5:17455356-17456608 REVERSE LENGTH=366
Length = 365
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPLEAKAPYYTRDVGSKVRFSSNYDLFRPPAANW 201
FFQV+NH + + + VR FHEE E K Y+ D ++ +++N+D+ NW
Sbjct: 92 FFQVINHGIPLTVLKDIKQGVRRFHEEDPEVKKQYFATDFNTRFAYNTNFDIHYSSPMNW 151
Query: 202 RDTL 205
+D+
Sbjct: 152 KDSF 155
>AT5G43450.1 | chr5:17457321-17458714 REVERSE LENGTH=363
Length = 362
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 142 FFQVVNHDVAKELTDAMLAAVRYFHEEPLEAKAPYYTRDVGSKVRFSSNYDLFRPPAANW 201
FFQV+NHDV + + + +VR FHE+ K Y D + +++++DL+ NW
Sbjct: 90 FFQVINHDVPLTVLEEIKESVRRFHEQDPVVKNQYLPTDNNKRFVYNNDFDLYHSSPLNW 149
Query: 202 RDTL 205
RD+
Sbjct: 150 RDSF 153
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.134 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,045,681
Number of extensions: 66412
Number of successful extensions: 214
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 218
Number of HSP's successfully gapped: 17
Length of query: 282
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 185
Effective length of database: 8,447,217
Effective search space: 1562735145
Effective search space used: 1562735145
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 111 (47.4 bits)