Os08g0387500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sulfated surface glycoprotein 185 precursor (SSG 185).
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Os08g0387500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sulfated surface glycoprotein 185 precursor (SSG 185).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.35 | 0.421 | 13.1 | -0.145 | 1.07 | 0.779 | 0.862 | 0.0481 | -0.623 | 8.18 | 71.79 | 709 | -- | -- |
| 80.34 | 0.417 | 13.1 | -0.146 | 1.08 | 0.795 | 0.843 | -- | -0.627 | 8.16 | 72.46 | 706 | -- | -- |
| 82.13 | 0.422 | 13.1 | -0.102 | 1.09 | 0.793 | -- | -0.212 | -0.632 | 8.24 | 77.92 | 743 | -- | -- |
| 82.19 | 0.422 | 13.1 | -0.0957 | 1.12 | 0.793 | -- | -- | -0.643 | 8.25 | 79 | 743 | -- | -- |
| 117.56 | 0.505 | 13.1 | -0.000307 | -- | 0.613 | -- | 0.313 | -0.555 | -- | 67.88 | 4344 | -- | -- |
| 92.43 | 0.451 | 13.1 | -0.0245 | 0.774 | -- | 0.506 | -- | -0.691 | 8.39 | -- | -- | -- | -- |
| 93.23 | 0.452 | 13.1 | -0.0096 | 0.774 | -- | -- | -- | -0.691 | 8.32 | -- | -- | -- | -- |
| 117.38 | 0.505 | 13.1 | -0.0283 | -- | 0.657 | -- | -- | -0.523 | -- | 67 | 4349 | -- | -- |
| 82.52 | 0.423 | 13.1 | -- | 1.12 | 0.766 | -- | -- | -0.643 | 8.25 | 79 | 741 | -- | -- |
| 126.49 | 0.526 | 13.2 | -0.00471 | -- | -- | -- | -- | -0.683 | -- | -- | -- | -- | -- |
| 93.23 | 0.452 | 13.1 | -- | 0.774 | -- | -- | -- | -0.69 | 8.32 | -- | -- | -- | -- |
| 117.43 | 0.505 | 13.1 | -- | -- | 0.64 | -- | -- | -0.53 | -- | 67 | 4334 | -- | -- |
| 126.49 | 0.525 | 13.2 | -- | -- | -- | -- | -- | -0.682 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.25 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 23 |
| 2 | 80.28 | humidity | 70 | 720 | < th | dose dependent | rect. | 7 | 11 |
| 43 | 80.37 | humidity | 70 | 720 | < th | dose dependent | sin | 23 | NA |
| 45 | 80.39 | humidity | 70 | 720 | < th | dose dependent | rect. | 10 | 7 |
| 52 | 80.42 | humidity | 70 | 720 | < th | dose dependent | rect. | 14 | 23 |
| 56 | 80.44 | humidity | 70 | 720 | < th | dose dependent | no | NA | NA |
| 108 | 80.44 | humidity | 70 | 720 | < th | dose dependent | rect. | 10 | 23 |
| 397 | 81.37 | humidity | 60 | 720 | > th | dose independent | rect. | 11 | 23 |
| 398 | 81.37 | humidity | 60 | 720 | > th | dose independent | rect. | 20 | 23 |
| 400 | 81.37 | humidity | 70 | 720 | < th | dose dependent | rect. | 13 | 4 |
| 402 | 81.38 | temperature | 25 | 10 | > th | dose dependent | rect. | 18 | 14 |
| 416 | 81.49 | humidity | 60 | 720 | > th | dose independent | rect. | 6 | 17 |
| 431 | 81.60 | humidity | 60 | 720 | > th | dose independent | rect. | 4 | 15 |
| 455 | 81.66 | humidity | 60 | 720 | < th | dose independent | rect. | 13 | 23 |
| 459 | 81.67 | humidity | 60 | 720 | > th | dose independent | rect. | 2 | 16 |
| 466 | 81.69 | humidity | 60 | 720 | < th | dose independent | rect. | 8 | 11 |
| 499 | 81.72 | humidity | 60 | 720 | < th | dose independent | no | NA | NA |
| 592 | 81.75 | humidity | 60 | 720 | < th | dose independent | sin | 23 | NA |
| 594 | 81.75 | humidity | 60 | 720 | > th | dose independent | rect. | 1 | 23 |
| 600 | 81.76 | humidity | 60 | 720 | < th | dose independent | rect. | 10 | 23 |
| 614 | 81.77 | humidity | 60 | 720 | > th | dose independent | rect. | 11 | 7 |
| 660 | 81.79 | humidity | 60 | 720 | > th | dose independent | rect. | 4 | 23 |
| 665 | 81.80 | humidity | 60 | 720 | > th | dose independent | rect. | 6 | 23 |
| 682 | 81.82 | humidity | 60 | 720 | > th | dose independent | rect. | 7 | 11 |
| 690 | 81.83 | humidity | 60 | 720 | < th | dose independent | rect. | 16 | 23 |
| 790 | 81.86 | humidity | 60 | 720 | > th | dose independent | no | NA | NA |
| 821 | 81.87 | humidity | 60 | 720 | > th | dose independent | sin | 22 | NA |
| 826 | 81.87 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 12 |
| 841 | 81.91 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 10 |
| 889 | 81.97 | humidity | 60 | 720 | > th | dose independent | sin | 20 | NA |
| 891 | 81.97 | humidity | 60 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 893 | 81.97 | humidity | 60 | 720 | > th | dose independent | rect. | 11 | 16 |
| 901 | 81.98 | humidity | 60 | 4320 | > th | dose independent | rect. | 19 | 18 |
| 908 | 81.99 | humidity | 60 | 4320 | > th | dose independent | rect. | 8 | 5 |
| 910 | 81.99 | humidity | 60 | 4320 | > th | dose independent | rect. | 23 | 14 |
| 922 | 82.00 | humidity | 60 | 720 | > th | dose independent | rect. | 11 | 14 |
| 943 | 82.02 | humidity | 60 | 720 | > th | dose independent | rect. | 14 | 23 |
| 948 | 82.03 | humidity | 60 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 967 | 82.04 | humidity | 50 | 720 | > th | dose dependent | sin | 0 | NA |
| 970 | 82.04 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 16 |